RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ZNF546Q86UE3 836 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 DERL3Q96Q80 235 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 LMF1Q96S06 567 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 MRI1Q9BV20 369 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 TTTY10Q9BZA0 68 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 WSB2Q9NYS7 404 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-207ENST00000553837 FOXJ3Q9UPW0 622 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 SLC35A3Q9Y2D2 325 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM131Q92545 1883 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 IFITM5A6NNB3 132 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 RLN1P04808 185 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 SRMP19623 302 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 DPP4P27487 766 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 DCDP81605 110 aaKnown RBP11.11□□□□□ -0.63
SHMT2-207ENST00000553837 GXYLT1Q4G148 440 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 FAM74A1Q5RGS3 127 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 AVPI1Q5T686 147 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 ALKBH2Q6NS38 261 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 ARMC6Q6NXE6 501 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 OR4C3Q8NH37 302 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 SLC2A12Q8TD20 617 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 TNFAIP8L1Q8WVP5 186 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 ZNRF4Q8WWF5 429 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 SMIM19Q96E16 107 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM138Q9NPI0 162 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 CBY1Q9Y3M2 126 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 HEATR5AQ86XA9 2040 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 PCDH15Q96QU1 1955 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 A0A1W2PPC4 97 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 KANTRA0A1W2PQU2 76 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SPP1P10451 314 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 ACHEP22303 614 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 MNDAP41218 407 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 GPR3P46089 330 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 RIDAP52758 137 aaKnown RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 IGLV3-21P80748 117 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SNTB1Q13884 538 aaKnown RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CBFBQ13951 182 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CSRP2Q16527 193 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 C3orf33Q6P1S2 294 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 MUC20Q8N307 709 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 OR51L1Q8NGJ5 315 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 OR14A16Q8NHC5 309 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 RBM18Q96H35 190 aaKnown RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CMSS1Q9BQ75 279 aaKnown RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 TPSD1Q9BZJ3 242 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SEBOXQ9HB31 216 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 C14orf105Q9NVL8 296 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 DMRT1Q9Y5R6 373 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 OR14I1A6ND48 311 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 RIIAD1A6NNX1 92 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 MCIDASD6RGH6 385 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CTNSO60931 367 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CLPSP04118 112 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CD1AP06126 327 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 RNH1P13489 461 aaKnown RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 HIST1H1CP16403 213 aaKnown RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 GABRA4P48169 554 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 KCNJ3P48549 501 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 POU4F2Q12837 409 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF141Q15928 474 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-207ENST00000553837 RPL13AP3Q6NVV1 102 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 PARGQ86W56 976 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CBLN2Q8IUK8 224 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SKA3Q8IX90 412 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 OR4K13Q8NH42 304 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 OR4C6Q8NH72 309 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 C16orf52Q8NHV5 167 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 SYNPRQ8TBG9 265 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 KLHDC7BQ96G42 594 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 HAO2Q9NYQ3 351 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 CHRNA9Q9UGM1 479 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 FBXL21Q9UKT6 434 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 ADAM18Q9Y3Q7 739 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
SHMT2-207ENST00000553837 RBBP9O75884 186 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 POU3F4P49335 361 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 GFERP55789 205 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 SPCS3P61009 180 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 RNF4P78317 190 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 SIRPAP78324 504 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 GAS6Q14393 721 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 CDK5R1Q15078 307 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 UNQ9370/PRO34162Q6UXP9 181 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 KCNRGQ8N5I3 272 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 BCORP1Q8N888 145 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 OR52E2Q8NGJ4 325 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms