RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 KLHL9Q9P2J3 617 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF726A6NNF4 738 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 KLK10O43240 276 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 TLX3O43711 291 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 UPK3AO75631 287 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 SULT1C4O75897 302 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 OR8G3PP0DMU2 310 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 ENTPD1P49961 510 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 CARD17Q5XLA6 110 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 RPL22L1Q6P5R6 122 aaKnown RBP17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 GLB1L2Q8IW92 636 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 RPS4Y2Q8TD47 263 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 NSMAFQ92636 917 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 GHSRQ92847 366 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 SMIM19Q96E16 107 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 KCTD7Q96MP8 289 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 SIAEQ9HAT2 523 aa17.39■□□□□ 0.37
RBFOX1-215ENST00000553186 METTL15A6NJ78 407 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 NPIPA2E9PIF3 369 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 NPIPA3F8WFD2 350 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 DLL1O00548 723 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 DVL2O14641 736 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 PHYHO14832 338 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 HRGP04196 525 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 SPARCP09486 303 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 PSMB10P40306 273 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 CLDN18P56856 261 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 RNFT1Q5M7Z0 435 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 LIPNQ5VXI9 398 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 LRFN4Q6PJG9 635 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 SLC22A16Q86VW1 577 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 MCHR2Q969V1 340 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 SCNM1Q9BWG6 230 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 NXF2Q9GZY0 626 aaKnown RBP17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 ACKR4Q9NPB9 350 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF716A6NP11 495 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 SC5DO75845 299 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF432O94892 652 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF708P17019 499 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 TGM4P49221 684 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF404Q494X3 552 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 TEX30Q5JUR7 227 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 SLC25A47Q6Q0C1 308 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 LRRC69Q6ZNQ3 347 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 LINC00299Q6ZSB3 139 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 FAM109AQ8N4B1 249 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF845Q96IR2 970 aaPredicted RBP17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 OR2M2Q96R28 347 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 GSTK1Q9Y2Q3 226 aa17.38■□□□□ 0.37
RBFOX1-215ENST00000553186 CD8B2A6NJW9 211 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 RGS9O75916 674 aaPredicted RBP17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 CD1AP06126 327 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 TACSTD2P09758 323 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 CD8BP10966 210 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 CALRP27797 417 aaKnown RBP17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 NANOS3P60323 173 aaKnown RBP17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 MOGQ16653 247 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 ABLIM2Q6H8Q1 611 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 SLC18B1Q6NT16 456 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 TMEM123Q8N131 208 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 FNDC8Q8TC99 324 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 ASB17Q8WXJ9 295 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 ROBO4Q8WZ75 1007 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 CPNE4Q96A23 557 aaPredicted RBP17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 GALNT8Q9NY28 637 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 SLCO1C1Q9NYB5 712 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 A3GALT2U3KPV4 340 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 LAMA5O15230 3695 aa17.37■□□□□ 0.37
RBFOX1-215ENST00000553186 IL1AP01583 271 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 ITGB2P05107 769 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 KRT8P05787 483 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 GDI2P50395 445 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 ROM1Q03395 351 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 DYNC1I2Q13409 638 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 SLC10A1Q14973 349 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF454Q8N9F8 522 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 MCFD2Q8NI22 146 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 ABHD4Q8TB40 342 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 HSD17B8Q92506 261 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 OR8B4Q96RC9 309 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 SMAD5Q99717 465 aaKnown RBP17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 MED18Q9BUE0 208 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 ABHD6Q9BV23 337 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 BARHL1Q9BZE3 327 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 IKZF2Q9UKS7 526 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 TRBV2A0A0J9YWF9 115 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 CDRT1O95170 752 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 QDPRP09417 244 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 EDNRAP25101 427 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 LAP3P28838 519 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 SDC2P34741 201 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 BMXP51813 675 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 TRAM1Q15629 374 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 FAM220AQ7Z4H9 259 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 YIPF7Q8N8F6 280 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 OR6Q1Q8NGQ2 317 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 C11orf40Q8WZ69 217 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 TTYH2Q9BSA4 534 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 MMP27Q9H306 513 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 ZDHHC11Q9H8X9 412 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms