RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 KNG1P01042 644 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 MT-ND1P03886 318 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 OR12D1P0DN82 309 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 MATN1P21941 496 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 PCGF2P35227 344 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 KRTAP10-3P60369 221 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 CCL8P80075 99 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 LCN2P80188 198 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 RELBQ01201 579 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 FUT5Q11128 374 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 FADDQ13158 208 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 SCARB2Q14108 478 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 CEACAM16Q2WEN9 425 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 RPS26P11Q5JNZ5 115 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 ZFP1Q6P2D0 407 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 WDFY1Q8IWB7 410 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 KIR3DL3Q8N743 410 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 FAM86B1Q8N7N1 296 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 C11orf65Q8NCR3 313 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 LRTOMTQ8WZ04 291 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 ITPKCQ96DU7 683 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 RBM4BQ9BQ04 359 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 SPATA9Q9BWV2 254 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 STX18Q9P2W9 335 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 FZR1Q9UM11 496 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 RCE1Q9Y256 329 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 RASD1Q9Y272 281 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 POLR3KQ9Y2Y1 108 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 WDR45Q9Y484 360 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 NOTCH3Q9UM47 2321 aa9.64□□□□□ -0.87
SUPT16H-202ENST00000552829 IGLV3-9A0A075B6K5 115 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 PRAMEF27A3QJZ7 478 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 A6NHS1 94 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 TIMM23O14925 209 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 FZD7O75084 574 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 NPIPB7O75200 414 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF682O95780 498 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 HLA-HP01893 362 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 OPN1SWP03999 348 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 BCHEP06276 602 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 RPS23P62266 143 aaKnown RBP9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 CDK6Q00534 326 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 TEKQ02763 1124 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 PCGF3Q3KNV8 242 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 PRAMEF8Q5VWM4 474 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 PRAMEF7Q5VXH5 474 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 Q6ZPA2 131 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 C9orf139Q6ZV77 190 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF627Q7L945 461 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 C16orf62Q7Z3J2 963 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 AMIGO2Q86SJ2 522 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 CMIPQ8IY22 773 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 PQLC1Q8N2U9 271 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 NRG4Q8WWG1 115 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 TMEM19Q96HH6 336 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 HINT3Q9NQE9 182 aaKnown RBP9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 MMP26Q9NRE1 261 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 EXD2Q9NVH0 621 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 TESQ9UGI8 421 aaKnown RBP9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 ANGPT4Q9Y264 503 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 AP4S1Q9Y587 144 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 NOX1Q9Y5S8 564 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 COL7A1Q02388 2944 aa9.63□□□□□ -0.87
SUPT16H-202ENST00000552829 IGHV1-69-2A0A0G2JMI3 117 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF99A8MXY4 864 aaPredicted RBP9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 C5orf58C9J3I9 102 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 CLDN25C9JDP6 229 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 TRAPPC2LH3BP13 241 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 FRS3O43559 492 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 CLPTM1O96005 669 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 CHRM4P08173 479 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF250P15622 560 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF12P17014 697 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 CLDN17P56750 224 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 EPS8Q12929 822 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF154Q13106 437 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ARMCX4Q5H9R4 360 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 MTX3Q5HYI7 312 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF362Q5T0B9 420 aaPredicted RBP9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 LPCAT4Q643R3 524 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 OLFML2AQ68BL7 652 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 HMGN2P46Q86SG4 172 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 RAB1CQ92928 201 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 DUS3LQ96G46 650 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 SEMA6AQ9H2E6 1030 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 PRDM13Q9H4Q3 707 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 GORASP2Q9H8Y8 452 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 BEX1Q9HBH7 125 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 ZNF224Q9NZL3 707 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 TAAR3PQ9P1P4 343 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 B3GAT1Q9P2W7 334 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 DUSP13Q9UII6 198 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 RIMS3Q9UJD0 308 aa9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 PURGQ9UJV8 347 aaKnown RBP9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 SOX21Q9Y651 276 aaPredicted RBP9.62□□□□□ -0.87
SUPT16H-202ENST00000552829 AUP1Q9Y679 476 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms