RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	CLPX	O76031	633 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	AQP8	O94778	261 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ABHD16A	O95870	558 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	KRT8	P05787	483 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	SPARC	P09486	303 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	EDNRA	P25101	427 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	CSNK1A1	P48729	337 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF133	P52736	654 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	SIRPA	P78324	504 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	FABP5	Q01469	135 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	CDK5R1	Q15078	307 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	MEP1B	Q16820	701 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	PCK2	Q16822	640 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	RNFT1	Q5M7Z0	435 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	SLC18B1	Q6NT16	456 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ARL9	Q6T311	187 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	IGFL3	Q6UXB1	125 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	FCRLA	Q7L513	359 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZADH2	Q8N4Q0	377 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	YIPF7	Q8N8F6	280 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	TBC1D15	Q8TC07	691 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	RPS4Y2	Q8TD47	263 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	THEM6	Q8WUY1	208 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ROBO4	Q8WZ75	1007 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	NSMAF	Q92636	917 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	TMEM203	Q969S6	136 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	MCHR2	Q969V1	340 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	INTS12	Q96CB8	462 aa	Known RBP	11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF385A	Q96PM9	386 aa	Known RBP	11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	TM9SF2	Q99805	663 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	TTYH2	Q9BSA4	534 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	SIAE	Q9HAT2	523 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	ACOXL	Q9NUZ1	547 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	GLTP	Q9NZD2	209 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	MRM2	Q9UI43	246 aa	Known RBP	11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	RCE1	Q9Y256	329 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	GSTK1	Q9Y2Q3	226 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	GRIP1	Q9Y3R0	1128 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	LIPG	Q9Y5X9	500 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	FLVCR1	Q9Y5Y0	555 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	MED13	Q9UHV7	2174 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	GVINP1	Q7Z2Y8	2422 aa		11.27	□□□□□ -0.6
CACNB3-223	ENST00000552480	TRGV5	A0A0B4J1U4	118 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480		A0A1W2PPL8	197 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	GABRP	O00591	440 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF432	O94892	652 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	MPZL1	O95297	269 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	SYNGR4	O95473	234 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	ITGB2	P05107	769 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	QDPR	P09417	244 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR8G3P	P0DMU2	310 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	PEX19	P40855	299 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	RPS27	P42677	84 aa	Known RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	GDI2	P50395	445 aa	Known RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	RASGEF1B	Q0VAM2	473 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	EIF2B1	Q14232	305 aa	Known RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	KCNMB1	Q16558	191 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	C10orf128	Q5T292	105 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	C22orf42	Q6IC83	251 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	KCTD18	Q6PI47	426 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	RPTN	Q6XPR3	784 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR10H5	Q8NGA6	315 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR6N1	Q8NGY5	312 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	C11orf40	Q8WZ69	217 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	SMIM19	Q96E16	107 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF845	Q96IR2	970 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	PGLYRP3	Q96LB9	341 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	KCTD7	Q96MP8	289 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	DACH2	Q96NX9	599 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	OR8B4	Q96RC9	309 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	DEFB127	Q9H1M4	99 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	CCDC86	Q9H6F5	360 aa	Known RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	LDAH	Q9H6V9	325 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	DKK4	Q9UBT3	224 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	ING1	Q9UK53	422 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	IKZF2	Q9UKS7	526 aa		11.27	□□□□□ -0.61
CACNB3-223	ENST00000552480	IGKV3D-15	A0A087WSY6	115 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	PSMD9	O00233	223 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	TFEC	O14948	347 aa	Predicted RBP	11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	GPRIN2	O60269	458 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SLC43A1	O75387	559 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	UPK3A	O75631	287 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SERPINA3	P01011	423 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	IL1A	P01583	271 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	IGHG3	P01860	377 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	ZNF24	P17028	368 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	PSMB10	P40306	273 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	PMP22	Q01453	160 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	ROM1	Q03395	351 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SRY	Q05066	204 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SLC3A1	Q07837	685 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	LRFN4	Q6PJG9	635 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	LRRC69	Q6ZNQ3	347 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	TMEM91	Q6ZNR0	172 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	LINC00299	Q6ZSB3	139 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	SPACA3	Q8IXA5	215 aa		11.26	□□□□□ -0.61
CACNB3-223	ENST00000552480	C20orf196	Q8IYI0	205 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms