RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 LRRC57Q8N9N7 239 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SDR9C7Q8NEX9 313 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 OR6Y1Q8NGX8 325 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 OR5R1Q8NH85 324 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 CEP70Q8NHQ1 597 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 VANGL1Q8TAA9 524 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 FAM45AQ8TCE6 357 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GPR119Q8TDV5 335 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 NPRL2Q8WTW4 380 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 IPCEF1Q8WWN9 437 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RAB40AQ8WXH6 277 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RAB8BQ92930 207 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNF524Q96C55 264 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ELMOD3Q96FG2 381 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 THOC1Q96FV9 657 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RCHY1Q96PM5 261 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 MTERF1Q99551 399 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SERPINI1Q99574 410 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 BPIFA3Q9BQP9 254 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 MECRQ9BV79 373 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 C1QTNF4Q9BXJ3 329 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 TRIM15Q9C019 465 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GFRA4Q9GZZ7 299 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 DPAGT1Q9H3H5 408 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 XAB2Q9HCS7 855 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 PALMDQ9NP74 551 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 KRCC1Q9NPI7 259 aaPredicted RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 PPANQ9NQ55 473 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 HINT3Q9NQE9 182 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ACOXLQ9NUZ1 547 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 GIN1Q9NXP7 522 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 ZNRD1Q9P1U0 126 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 MYEF2Q9P2K5 600 aaKnown RBP1.84□□□□□ -2.11
PTCH1-223ENST00000551623 OR5V1Q9UGF6 321 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 PRDM4Q9UKN5 801 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 FBXL3Q9UKT7 428 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 RCE1Q9Y256 329 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 HDGFL3Q9Y3E1 203 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 OR10H1Q9Y4A9 318 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 DTNAQ9Y4J8 743 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 SNX13Q9Y5W8 968 aa1.84□□□□□ -2.11
PTCH1-223ENST00000551623 WNK2Q9Y3S1 2297 aa1.84□□□□□ -2.12
PTCH1-223ENST00000551623 RYR1P21817 5038 aa1.84□□□□□ -2.12
PTCH1-223ENST00000551623 CSMD3Q7Z407 3707 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 IGHV1-69DA0A0B4J2H0 117 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CENPVL3A0A0U1RRI6 287 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 DPPA5A6NC42 116 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MIF4GDA9UHW6 222 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 C9JVG2 144 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF587BE7ETH6 402 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 H3BSA7 217 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 K7EPI3 171 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 SULT2B1O00204 365 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 P2RY10O00398 339 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 PHYHO14832 338 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 EIF4E2O60573 245 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 IGHV1-69P01742 117 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 IFNW1P05000 195 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 LIPFP07098 398 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 QDPRP09417 244 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CCDC159P0C7I6 412 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 BCKDHAP12694 445 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MPIP34949 423 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MDH2P40926 338 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 APOBEC1P41238 236 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 HSPA7P48741 367 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 P2RY4P51582 365 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MAPK12P53778 367 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 KLF3P57682 345 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 UBE2NP61088 152 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 PHEXP78562 749 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 SKP2Q13309 424 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 PMS2P11Q13670 270 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CRYMQ14894 314 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MAD2L1BPQ15013 274 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ZMYND11Q15326 602 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 TOMM34Q15785 309 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 AANATQ16613 207 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MOGQ16653 247 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 VPS26BQ4G0F5 336 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 GGTA1PQ4G0N0 100 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ESCO2Q56NI9 601 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 HSP90AA5PQ58FG0 334 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 TEX35Q5T0J7 233 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 STEAP4Q687X5 459 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 AADACL2Q6P093 401 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM154Q6P9G4 183 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 PAQR6Q6TCH4 344 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CBLN3Q6UW01 205 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CASP12Q6UXS9 341 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF771Q7L3S4 317 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 LINGO2Q7L985 606 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 COMMD6Q7Z4G1 85 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 LRP11Q86VZ4 500 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CALHM3Q86XJ0 350 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 C1orf174Q8IYL3 243 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 FAM9CQ8IZT9 166 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CADM3Q8N126 398 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms