RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 JAGN1Q8N5M9 183 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 VSTM2LQ96N03 204 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 MKKSQ9NPJ1 570 aaPredicted RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PRTFDC1Q9NRG1 225 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PIPOXQ9P0Z9 390 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 ABRACLQ9P1F3 81 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 FBXO4Q9UKT5 387 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 MOKQ9UQ07 419 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PCDH15Q96QU1 1955 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 hCG_1807616A0A1W2PRN6 198 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 TOX3O15405 576 aaPredicted RBP10.03□□□□□ -0.8
LINC00661-204ENST00000549354 CSF2RBP32927 897 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 ARRB1P49407 418 aaPredicted RBP10.03□□□□□ -0.8
LINC00661-204ENST00000549354 H2BFSP57053 126 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 SORDQ00796 357 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 PSG6Q00889 435 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 UBE2NLQ5JXB2 153 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 PM20D2Q8IYS1 436 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 CHST4Q8NCG5 386 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 LSM14AQ8ND56 463 aaKnown RBP10.03□□□□□ -0.8
LINC00661-204ENST00000549354 STK35Q8TDR2 534 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF524Q96C55 264 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 AMELYQ99218 206 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 LANCL2Q9NS86 450 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 C14orf105Q9NVL8 296 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 V9GY05 133 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 PTPRZ1P23471 2315 aaPredicted RBP10.03□□□□□ -0.8
LINC00661-204ENST00000549354 MYO7BQ6PIF6 2116 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 TEX51A0A1B0GUA7 166 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 FBXW4P57775 412 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 SPOCK1Q08629 439 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 CD226Q15762 336 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 HGDQ93099 445 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 TSLPQ969D9 159 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 ALG12Q9BV10 488 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 LAMP5Q9UJQ1 280 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 KCNMB2Q9Y691 235 aa10.03□□□□□ -0.8
LINC00661-204ENST00000549354 ADAMTS20P59510 1910 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 A0A1B0GTQ1 180 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF879B4DU55 563 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 SERPINA3P01011 423 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 CLPSP04118 112 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.8
LINC00661-204ENST00000549354 VSIG10L2P0DP72 767 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 SLC2A1P11166 492 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 GTF2F2P13984 249 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 SLC2A5P22732 501 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 EPHA8P29322 1005 aaPredicted RBP10.02□□□□□ -0.8
LINC00661-204ENST00000549354 SERTAD2Q14140 314 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 METTL11BQ5VVY1 283 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 OR51S1Q8NGJ8 323 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 MAFAQ8NHW3 353 aaPredicted RBP10.02□□□□□ -0.8
LINC00661-204ENST00000549354 RGP1Q92546 391 aaPredicted RBP10.02□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.8
LINC00661-204ENST00000549354 SGTBQ96EQ0 304 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 CUTCQ9NTM9 273 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 PRR13Q9NZ81 148 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 MMACHCQ9Y4U1 282 aa10.02□□□□□ -0.8
LINC00661-204ENST00000549354 PDCD5O14737 125 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 PTP4A3O75365 173 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ICAM2P13598 275 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ACHEP22303 614 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 GRK6P43250 576 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 VWA2Q5GFL6 755 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 TSSK4Q6SA08 328 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 TMPRSS11FQ6ZWK6 438 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 MAML2Q8IZL2 1156 aaPredicted RBP10.02□□□□□ -0.81
LINC00661-204ENST00000549354 C16orf52Q8NHV5 167 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 KTI12Q96EK9 354 aaPredicted RBP10.02□□□□□ -0.81
LINC00661-204ENST00000549354 KLHL15Q96M94 604 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 DUSP23Q9BVJ7 150 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ZNF768Q9H5H4 540 aaKnown RBP10.02□□□□□ -0.81
LINC00661-204ENST00000549354 SUSD2Q9UGT4 822 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ZNF230Q9UIE0 474 aaPredicted RBP10.02□□□□□ -0.81
LINC00661-204ENST00000549354 KCNG2Q9UJ96 466 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 VDAC3Q9Y277 283 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 PLEKHA6Q9Y2H5 1048 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 IGKV3D-11A0A0A0MRZ8 115 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 LY6G6EA0A0G2JKS1 128 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 MCRIP1C9JLW8 97 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 NPIPB9F8W1W9 429 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 H3BML4 177 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 LYPD3O95274 346 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 NMBP08949 121 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 SPI1P17947 270 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ADRA2CP18825 462 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 HLXQ14774 488 aaPredicted RBP10.02□□□□□ -0.81
LINC00661-204ENST00000549354 KCTD20Q7Z5Y7 419 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ZNF615Q8N8J6 731 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 OR4S1Q8NGB4 309 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 SAP25Q8TEE9 199 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 NPRL2Q8WTW4 380 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 CMBLQ96DG6 245 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 ACTR6Q9GZN1 396 aa10.02□□□□□ -0.81
LINC00661-204ENST00000549354 GPR160Q9UJ42 338 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms