RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 HLA-DPB1P04440 258 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ITGB2P05107 769 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 QDPRP09417 244 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 SPARCP09486 303 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 GAAP10253 952 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 CELP19835 753 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ALOX5APP20292 161 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 GALP22466 123 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 CD79BP40259 229 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF84P51523 738 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF133P52736 654 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 OR12D2P58182 307 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 TUBA1BP68363 451 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 DBPQ10586 325 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 TP53I3Q53FA7 332 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF544Q6NX49 715 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 USP43Q70EL4 1123 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 TUBA1AQ71U36 451 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 AAED1Q7RTV5 226 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 DPY19L4Q7Z388 723 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 C20orf196Q8IYI0 205 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ZIC4Q8N9L1 334 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 THEM6Q8WUY1 208 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 NSMAFQ92636 917 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 MCHR2Q969V1 340 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 SARAFQ96BY9 339 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 FAM122AQ96E09 287 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF845Q96IR2 970 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF385AQ96PM9 386 aaKnown RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 TIMP4Q99727 224 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 CHCHD6Q9BRQ6 235 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ULBP2Q9BZM5 246 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 ISG20L2Q9H9L3 353 aaKnown RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 GP6Q9HCN6 339 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 EXOSC4Q9NPD3 245 aaKnown RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 MRPL22Q9NWU5 206 aaKnown RBP10.99□□□□□ -0.65
RAB5B-204ENST00000548068 IKZF2Q9UKS7 526 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 CAMK2AQ9UQM7 478 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 B3GNT3Q9Y2A9 372 aa10.99□□□□□ -0.65
RAB5B-204ENST00000548068 A0A1W2PPW3 197 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF724A8MTY0 619 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 CD1AP06126 327 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 UGT2B10P36537 528 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 SERPINB10P48595 397 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 TGM4P49221 684 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 HCCSP53701 268 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 VBP1P61758 197 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 EIF2B1Q14232 305 aaKnown RBP10.98□□□□□ -0.65
RAB5B-204ENST00000548068 ETFDHQ16134 617 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 KCNMB1Q16558 191 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 TBR1Q16650 682 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 PCK2Q16822 640 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF684Q5T5D7 378 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 RPL22L1Q6P5R6 122 aaKnown RBP10.98□□□□□ -0.65
RAB5B-204ENST00000548068 WDFY1Q8IWB7 410 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 GPR137CQ8N3F9 429 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 RFLNBQ8N5W9 214 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 YIPF7Q8N8F6 280 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 SMAP2Q8WU79 429 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-204ENST00000548068 RPL3LQ92901 407 aaKnown RBP10.98□□□□□ -0.65
RAB5B-204ENST00000548068 PELI1Q96FA3 418 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 WDYHV1Q96HA8 205 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 CDADC1Q9BWV3 514 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 PRDM14Q9GZV8 571 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 OR51E2Q9H255 320 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 SPRR3Q9UBC9 169 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-204ENST00000548068 ZMIZ1Q9ULJ6 1067 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 GSTK1Q9Y2Q3 226 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 POLR1DQ9Y2S0 133 aa10.98□□□□□ -0.65
RAB5B-204ENST00000548068 FREM2Q5SZK8 3169 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 PNMA8CA0A1B0GUJ8 204 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 OR14I1A6ND48 311 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 DHHO43323 396 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 PLPP2O43688 288 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 GPRIN2O60269 458 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 ZNF254O75437 659 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 GPANK1O95872 356 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 LALBAP00709 142 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 SERPINA3P01011 423 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 NR4A1P22736 598 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 EDNRAP25101 427 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 CRYBB2P43320 205 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 SELENOPP49908 381 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 LSM3P62310 102 aaKnown RBP10.97□□□□□ -0.65
RAB5B-204ENST00000548068 SIRPAP78324 504 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 ROM1Q03395 351 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 AQP6Q13520 282 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 DOC2BQ14184 412 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 SPCS2Q15005 226 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 CDK5R1Q15078 307 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 SF3B4Q15427 424 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■■■ 31.6
RAB5B-204ENST00000548068 STK11Q15831 433 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 RIPPLY2Q5TAB7 128 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 CD200R1LQ6Q8B3 271 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 FOXL2NBQ6ZUU3 175 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 KRT77Q7Z794 578 aa10.97□□□□□ -0.65
RAB5B-204ENST00000548068 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.97□□□□□ -0.65
RAB5B-204ENST00000548068 SIAH3Q8IW03 269 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms