RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CFPP27918 469 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 CRABP1P29762 137 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 CCKBRP32239 447 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 CXCL12P48061 93 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 GALK2Q01415 458 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 GLO1Q04760 184 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 C17orf67Q0P5P2 114 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 NKAIN1Q4KMZ8 207 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 KCTD18Q6PI47 426 aaPredicted RBP13.96□□□□□ -0.17
BRF1-212ENST00000547562 KRT77Q7Z794 578 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 OR6S1Q8NH40 331 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 DACT3Q96B18 629 aaPredicted RBP13.96□□□□□ -0.17
BRF1-212ENST00000547562 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 EMC3Q9P0I2 261 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 SLC22A13Q9Y226 551 aa13.96□□□□□ -0.17
BRF1-212ENST00000547562 ADAMTS9Q9P2N4 1935 aa13.96□□□□□ -0.18
BRF1-212ENST00000547562 RALGAPA1Q6GYQ0 2036 aa13.96□□□□□ -0.18
BRF1-212ENST00000547562 SOX1O00570 391 aaPredicted RBP13.95□□□□□ -0.18
BRF1-212ENST00000547562 TIAF1O95411 115 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 SYPP08247 313 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 ACY1Q03154 408 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 PUDPQ08623 228 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 PLA2G7Q13093 441 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 OLFML2AQ68BL7 652 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 GLB1L2Q8IW92 636 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 KDM8Q8N371 416 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 ZNF248Q8NDW4 579 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 NUBPLQ8TB37 319 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 ABHD6Q9BV23 337 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 BEX1Q9HBH7 125 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 FLVCR2Q9UPI3 526 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 MS4A18H0YCH9 400 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 ALOX12BO75342 701 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 GLSO94925 669 aaPredicted RBP13.95□□□□□ -0.18
BRF1-212ENST00000547562 EIF2B1Q14232 305 aaKnown RBP13.95□□□□□ -0.18
BRF1-212ENST00000547562 MS4A18Q3C1V0 323 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 OR7E24Q6IFN5 339 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 DNM1P46Q6ZS02 220 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 LUZP2Q86TE4 346 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 GTF2A1LQ9UNN4 478 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 COA3Q9Y2R0 106 aaPredicted RBP13.95□□□□□ -0.18
BRF1-212ENST00000547562 WDR87Q6ZQQ6 2873 aa13.95□□□□□ -0.18
BRF1-212ENST00000547562 TMEM265A0A087WTH1 108 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 CCDC85CA6NKD9 419 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 TNRC18O15417 2968 aaPredicted RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 XRCC3O43542 346 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 SSNA1O43805 119 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 WNT11O96014 354 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 RIDAP52758 137 aaKnown RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 SUMO3P55854 103 aaPredicted RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 MFGE8Q08431 387 aaPredicted RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 ZNF454Q8N9F8 522 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 ZNF431Q8TF32 576 aaPredicted RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 HGDQ93099 445 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 HLA-CQ95604 372 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 PPP1R14AQ96A00 147 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 ARL5BQ96KC2 179 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 PTTG3PQ9NZH4 202 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 MGAT4AQ9UM21 535 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 PPIEQ9UNP9 301 aaKnown RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 LRP12Q9Y561 859 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 MEIKINA0A087WXM9 373 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 A0A1B0GVI7 797 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 A6NIZ1 184 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 RAD1O60671 282 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 PRAF2O60831 178 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 TGM6O95932 706 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 HPXP02790 462 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 PNLIPP16233 465 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 DCTDP32321 178 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 APOBEC1P41238 236 aaKnown RBP13.94□□□□□ -0.18
BRF1-212ENST00000547562 RAP1BP61224 184 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 RAP1AP62834 184 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 ZP4Q12836 540 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 MFSD13AQ14CX5 517 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 OR7A5Q15622 319 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 GUSBP11Q6P575 273 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 OR51D1Q8NGF3 324 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 OR52N5Q8NH56 324 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 MFSD8Q8NHS3 518 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 OR10A4Q9H209 315 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 MED11Q9P086 117 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 TRIOBPQ9H2D6 2365 aa13.94□□□□□ -0.18
BRF1-212ENST00000547562 CPED1A4D0V7 1026 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 TMEM200CA6NKL6 621 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 SCRG1O75711 98 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 ALX3O95076 343 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 MPZL1O95297 269 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 DCNP07585 359 aaKnown RBP13.93□□□□□ -0.18
BRF1-212ENST00000547562 ITGA5P08648 1049 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 HTR2BP41595 481 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 VEGFCP49767 419 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 SQSTM1Q13501 440 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 ASPHD2Q6ICH7 369 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 ANKRD16Q6P6B7 361 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 PAPD4Q6PIY7 484 aaKnown RBP13.93□□□□□ -0.18
BRF1-212ENST00000547562 ARSKQ6UWY0 536 aa13.93□□□□□ -0.18
BRF1-212ENST00000547562 ZNF767PQ75MW2 155 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms