RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 TIGD6Q17RP2 521 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 C10orf128Q5T292 105 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 OR2A2Q6IF42 318 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 FGD2Q7Z6J4 655 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 CDC20BQ86Y33 519 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF100Q8IYN0 542 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 FAM57AQ8TBR7 257 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 APH1AQ96BI3 265 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 SNRNP40Q96DI7 357 aaKnown RBP12.2□□□□□ -0.46
SCARB1-209ENST00000545305 TM9SF2Q99805 663 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 SLX1AQ9BQ83 275 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 SLCO5A1Q9H2Y9 848 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 NDUFA13Q9P0J0 144 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 LAMP5Q9UJQ1 280 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 EMC9Q9Y3B6 208 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 CFAP47Q6ZTR5 3102 aa12.2□□□□□ -0.46
SCARB1-209ENST00000545305 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF593O00488 134 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 ZNHIT1O43257 154 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 TMCC2O75069 709 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 SS18L1O75177 396 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 MT-ND5P03915 603 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 HOXD4P09016 255 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 AGTR1P30556 359 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 TDGF1P3P51864 188 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 GP2P55259 537 aaKnown RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF85Q03923 595 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 RBPJQ06330 500 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 SYT6Q5T7P8 510 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 C1orf185Q5T7R7 199 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 RIPPLY2Q5TAB7 128 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 NSUN5P2Q63ZY6 315 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 SLC18B1Q6NT16 456 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 LRFN4Q6PJG9 635 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 GFRALQ6UXV0 394 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 CD163Q86VB7 1156 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 OR13F1Q8NGS4 319 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 SMAP2Q8WU79 429 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 SNX33Q8WV41 574 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 COG8Q96MW5 612 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 OR5M11Q96RB7 305 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 CDADC1Q9BWV3 514 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 RBM24Q9BX46 236 aaKnown RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 LSM2Q9Y333 95 aaKnown RBP12.19□□□□□ -0.46
SCARB1-209ENST00000545305 LOC400499M0QZD8 3231 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 MGAQ8IWI9 3026 aa12.19□□□□□ -0.46
SCARB1-209ENST00000545305 PRRG2O14669 202 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 UPK3AO75631 287 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 SEC14L2O76054 403 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 HCCSP53701 268 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 EIF2B1Q14232 305 aaKnown RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 MEP1BQ16820 701 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ARMCX4Q5H9R4 360 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 PHYHD1Q5SRE7 291 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 OR2G6Q5TZ20 316 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF322Q6U7Q0 402 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 RPTNQ6XPR3 784 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 FAM220AQ7Z4H9 259 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ABHD12BQ7Z5M8 362 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 OTOSQ8NHW6 89 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 CPT1CQ8TCG5 803 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 SPRYD4Q8WW59 207 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ASB17Q8WXJ9 295 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 C11orf40Q8WZ69 217 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 TMIGD2Q96BF3 282 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ALKBH3Q96Q83 286 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-209ENST00000545305 MGLLQ99685 303 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 TTYH2Q9BSA4 534 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 TTTY10Q9BZA0 68 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 ASF1BQ9NVP2 202 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 UPB1Q9UBR1 384 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 COPS3Q9UNS2 423 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 UGT2A1Q9Y4X1 527 aa12.18□□□□□ -0.46
SCARB1-209ENST00000545305 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 A6NHS1 94 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 TTLL8A6PVC2 850 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF587BE7ETH6 402 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 J3QLW9 94 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 MPZL1O95297 269 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 ZNF19P17023 458 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 NPR2P20594 1047 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 MSR1P21757 451 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 CDAP32320 146 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 NTF4P34130 210 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 PER3P56645 1201 aa12.17□□□□□ -0.46
SCARB1-209ENST00000545305 ROR2Q01974 943 aaKnown RBP12.17□□□□□ -0.46
SCARB1-209ENST00000545305 MLLT11Q13015 90 aaPredicted RBP12.17□□□□□ -0.46
SCARB1-209ENST00000545305 STK11Q15831 433 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms