RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CSNK1A1P48729 337 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 UCP2P55851 309 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 RBBP4Q09028 425 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 BAMBIQ13145 260 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 MAPRE2Q15555 327 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 CYP51A1Q16850 503 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 ALG10BQ5I7T1 473 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 FAM209AQ5JX71 171 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 FAM91A1Q658Y4 838 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 C11orf65Q8NCR3 313 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 BHLHE22Q8NFJ8 381 aaPredicted RBP10.85□□□□□ -0.67
USP28-212ENST00000544750 DNAJA4Q8WW22 397 aaPredicted RBP10.85□□□□□ -0.67
USP28-212ENST00000544750 C11orf40Q8WZ69 217 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 RCN3Q96D15 328 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 ELMOD3Q96FG2 381 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 GAL3ST1Q99999 423 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 BCL2L14Q9BZR8 327 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 MYLK2Q9H1R3 596 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 OR51B6Q9H340 312 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 DECR2Q9NUI1 292 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 TMEM38BQ9NVV0 291 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 RPS6KB2Q9UBS0 482 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 PURGQ9UJV8 347 aaKnown RBP10.85□□□□□ -0.67
USP28-212ENST00000544750 ANGPT4Q9Y264 503 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 MMP24Q9Y5R2 645 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 ZNF726A6NNF4 738 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 LRRN3E7EW58 273 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 SNX3O60493 162 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 TPST2O60704 377 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 FOXH1O75593 365 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 NPPAP01160 153 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 OPN1SWP03999 348 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 LCKP06239 509 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 ADH4P08319 380 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 OR8G3PP0DMU2 310 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 ZNF12P17014 697 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 MMP15P51511 669 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 ZNF154Q13106 437 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 CYLC2Q14093 348 aaPredicted RBP10.84□□□□□ -0.67
USP28-212ENST00000544750 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 TSTQ16762 297 aaKnown RBP10.84□□□□□ -0.67
USP28-212ENST00000544750 ARMCX4Q5H9R4 360 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 LEG1Q6P5S2 330 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 ULK3Q6PHR2 472 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 KRT73Q86Y46 540 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 GPR32P1Q8NGA4 272 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 OR8J3Q8NGG0 315 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 SH3GL3Q99963 347 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 ASPNQ9BXN1 380 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 C1orf198Q9H425 327 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 CDH20Q9HBT6 801 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 GLTPQ9NZD2 209 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 ZNF281Q9Y2X9 895 aa10.84□□□□□ -0.67
USP28-212ENST00000544750 A0A0B4J2E0 115 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 A0A1B0GX12 115 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 CCDC22O60826 627 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 COX4I1P13073 169 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 CD247P20963 164 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 ZNF81P51508 661 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 BIDP55957 195 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 GNGT1P63211 74 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 PMS2P3Q13401 168 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 MOGQ16653 247 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 DUSP7Q16829 419 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 VMACQ2NL98 169 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 C8orf82Q6P1X6 216 aaPredicted RBP10.83□□□□□ -0.68
USP28-212ENST00000544750 ARMC8Q8IUR7 673 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 SMYD1Q8NB12 490 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 OR6X1Q8NH79 312 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 RP9Q8TA86 221 aaKnown RBP10.83□□□□□ -0.68
USP28-212ENST00000544750 CCL17Q92583 94 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 SLC25A28Q96A46 364 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 TAMM41Q96BW9 452 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 SLC47A1Q96FL8 570 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 ZNF583Q96ND8 569 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 ZNF607Q96SK3 696 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 SPATA5L1Q9BVQ7 753 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 FAM107BQ9H098 131 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 CACYBPQ9HB71 228 aaKnown RBP10.83□□□□□ -0.68
USP28-212ENST00000544750 PDP1Q9P0J1 537 aaPredicted RBP10.83□□□□□ -0.68
USP28-212ENST00000544750 GMPR2Q9P2T1 348 aaKnown RBP10.83□□□□□ -0.68
USP28-212ENST00000544750 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 AUP1Q9Y679 476 aa10.83□□□□□ -0.68
USP28-212ENST00000544750 GMNCA6NCL1 334 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 A8MXK9 166 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 M0QX08 132 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 DHHO43323 396 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 IGHV2-70P01814 119 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 IGHMP01871 453 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 MMP7P09237 267 aaPredicted RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 GLO1Q04760 184 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 SLC3A1Q07837 685 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 SRSF4Q08170 494 aaKnown RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 HNRNPA0Q13151 305 aaKnown RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 NPTX1Q15818 432 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms