RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	ZNF836	Q6ZNA1	936 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	TEX43	Q6ZNM6	134 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639		Q6ZSR3	168 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	HDDC2	Q7Z4H3	204 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	PGAM4	Q8N0Y7	254 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	EID2	Q8N6I1	236 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	SPATA4	Q8NEY3	305 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	OR5W2	Q8NH69	310 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	GPR151	Q8TDV0	419 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	CREB3L1	Q96BA8	519 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	NDFIP1	Q9BT67	221 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	ISYNA1	Q9NPH2	558 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	SLC2A8	Q9NY64	477 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	ZNF282	Q9UDV7	671 aa	Predicted RBP	2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	OPN4	Q9UHM6	478 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	ZNF222	Q9UK12	451 aa		2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	LSM7	Q9UK45	103 aa	Known RBP	2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639	YTHDF2	Q9Y5A9	579 aa	Known RBP	2.43	□□□□□ -2.02
RAP1B-231	ENST00000544639		H0Y8G0	127 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	MRPS12	O15235	138 aa	Known RBP	2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	RAB3D	O95716	219 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	FABP3	P05413	133 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	CISD3	P0C7P0	127 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	PMEL	P40967	661 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	CDKN2B	P42772	138 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	SULT1E1	P49888	294 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	CCNH	P51946	323 aa	Predicted RBP	2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	ACTG2	P63267	376 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	ECH1	Q13011	328 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	VPS26B	Q4G0F5	336 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	C5orf47	Q569G3	176 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	BIVM	Q86UB2	503 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	OAF	Q86UD1	273 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	KCNG3	Q8TAE7	436 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	CXorf40A	Q8TE69	158 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	FRZB	Q92765	325 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	PKIB	Q9C010	78 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	ING4	Q9UNL4	249 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	IGSF9B	Q9UPX0	1349 aa		2.42	□□□□□ -2.02
RAP1B-231	ENST00000544639	SPRR5	A0A1B0GTR4	108 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	CDC7	O00311	574 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	MPHOSPH10	O00566	681 aa	Known RBP	2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	B4GALT5	O43286	388 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	PALM	O75781	387 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	CLPX	O76031	633 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	GABARAP	O95166	117 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	RHOXF2B	P0C7M4	288 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	UQCRFS1P1	P0C7P4	283 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	IGHV1-8	P0DP01	117 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	PSMC3	P17980	439 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	TNNI1	P19237	187 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	CHML	P26374	656 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	MAS1L	P35410	378 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	AQP2	P41181	271 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	NSG1	P42857	185 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	ATP5I	P56385	69 aa	Predicted RBP	2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	RAP1A	P62834	184 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	MOBP	Q13875	183 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	GINS1	Q14691	196 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	ANKRD22	Q5VYY1	191 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639		Q5W150	140 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	ANKRD26P1	Q6NSI1	321 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	NANOGP8	Q6NSW7	305 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	NANOGNB	Q7Z5D8	188 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	FAM228A	Q86W67	206 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	FBXL13	Q8NEE6	735 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	NOXO1	Q8NFA2	376 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	AKR7L	Q8NHP1	331 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	SLC2A14	Q8TDB8	520 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	PDXP	Q96GD0	296 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	ILKAP	Q9H0C8	392 aa	Predicted RBP	2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	PARP12	Q9H0J9	701 aa	Known RBP	2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	FGF20	Q9NP95	211 aa	Predicted RBP	2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	HPCAL4	Q9UM19	191 aa		2.41	□□□□□ -2.02
RAP1B-231	ENST00000544639	IGHV5-10-1	A0A0J9YXX1	117 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	ZNF816-ZNF321P	A0A0X1KG74	233 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639		A0A1W2PP18	115 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	TMEM150B	A6NC51	233 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	ZNF705G	A8MUZ8	300 aa	Predicted RBP	2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	TCP11X1	B4DZS4	312 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	DPM1	O60762	260 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	SRP72	O76094	671 aa	Known RBP	2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	CLIC3	O95833	236 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	TSPAN13	O95857	204 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	BCHE	P06276	602 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	NAMPT	P43490	491 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	CSNK1A1	P48729	337 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	ZNF138	P52744	262 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	SYCN	Q0VAF6	134 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	TCP10	Q12799	353 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	MAB21L1	Q13394	359 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	ZSCAN26	Q16670	478 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	ABCA11P	Q4W5N1	156 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	SASS6	Q6UVJ0	657 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	FAM43B	Q6ZT52	329 aa	Predicted RBP	2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	MMAA	Q8IVH4	418 aa	Known RBP	2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	SLC22A9	Q8IVM8	553 aa		2.4	□□□□□ -2.03
RAP1B-231	ENST00000544639	TTC5	Q8N0Z6	440 aa		2.4	□□□□□ -2.03

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms