RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FAM27BQ5VT28 67 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 SHQ1Q6PI26 577 aaKnown RBP16.62■□□□□ 0.25
DDX55-211ENST00000544429 DPPA2Q7Z7J5 298 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 NANOS1Q8WY41 292 aaKnown RBP16.62■□□□□ 0.25
DDX55-211ENST00000544429 HTRA1Q92743 480 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 SH3GL3Q99963 347 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 IFT27Q9BW83 186 aa16.62■□□□□ 0.25
DDX55-211ENST00000544429 PDP1Q9P0J1 537 aaPredicted RBP16.62■□□□□ 0.25
DDX55-211ENST00000544429 IGFBP1P08833 259 aaPredicted RBP16.61■□□□□ 0.25
DDX55-211ENST00000544429 MMP7P09237 267 aaPredicted RBP16.61■□□□□ 0.25
DDX55-211ENST00000544429 DANCRP0C864 163 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 HIST1H1CP16403 213 aaKnown RBP16.61■□□□□ 0.25
DDX55-211ENST00000544429 RAB1AP62820 205 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 NAAAQ02083 359 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 ETFDHQ16134 617 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 B3GLCTQ6Y288 498 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 ZNF584Q8IVC4 421 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 LNX2Q8N448 690 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 NSMAFQ92636 917 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 SYT4Q9H2B2 425 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 UBTD1Q9HAC8 227 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 EDARQ9UNE0 448 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 PLEKHA6Q9Y2H5 1048 aa16.61■□□□□ 0.25
DDX55-211ENST00000544429 PRRC2AP48634 2157 aaKnown RBP16.61■□□□□ 0.25
DDX55-211ENST00000544429 E7EQL1 145 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 E2F6O75461 281 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 FARS2O95363 451 aaKnown RBP16.6■□□□□ 0.25
DDX55-211ENST00000544429 CD79AP11912 226 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 CALCRP30988 508 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 GIPRP48546 466 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 IDH3GP51553 393 aaPredicted RBP16.6■□□□□ 0.25
DDX55-211ENST00000544429 KPNB1Q14974 876 aaKnown RBP16.6■□□□□ 0.25
DDX55-211ENST00000544429 TESK1Q15569 626 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 PGGHGQ32M88 737 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 CLEC12AQ5QGZ9 265 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 FAHD1Q6P587 224 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
DDX55-211ENST00000544429 NPEPL1Q8NDH3 523 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 OR52L1Q8NGH7 329 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 NUAK2Q9H093 628 aa16.6■□□□□ 0.25
DDX55-211ENST00000544429 IGLV1-36A0A0B4J1U3 117 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 ATP6V1G2-DDX39BF2Z307 99 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 H3BNX3 289 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 DCTN6O00399 190 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 SOX14O95416 240 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 SCG5P05408 212 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 PATE4P0C8F1 98 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 FCGR1AP12314 374 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 ANXA8P13928 327 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 PRKACGP22612 351 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 FASP25445 335 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 CAPZA2P47755 286 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 CDH11P55287 796 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 PIGFQ07326 219 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 ENDOGQ14249 297 aaKnown RBP16.59■□□□□ 0.25
DDX55-211ENST00000544429 SLC22A25Q6T423 547 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 ZBTB46Q86UZ6 589 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 IL17RDQ8NFM7 739 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 OR4Q3Q8NH05 313 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 OR5K1Q8NHB7 308 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 FBXO17Q96EF6 278 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 MS4A3Q96HJ5 214 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 NMNAT3Q96T66 252 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 CXXC4Q9H2H0 198 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 POLE4Q9NR33 117 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 FBXL3Q9UKT7 428 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 MOKQ9UQ07 419 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 BAIAP2Q9UQB8 552 aa16.59■□□□□ 0.25
DDX55-211ENST00000544429 IGHV2OR16-5A0A0B4J2B6 119 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 OR6C68A6NDL8 312 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 SLC16A7O60669 478 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 CRYAAP02489 173 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 SERPINA5P05154 406 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 CST2P09228 141 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 ZNF35P13682 527 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 DNASE1P24855 282 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 PTDSS1P48651 473 aaKnown RBP16.58■□□□□ 0.24
DDX55-211ENST00000544429 KEAP1Q14145 624 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 KCNMB1Q16558 191 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 SLC36A2Q495M3 483 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 LEG1Q6P5S2 330 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 SLC16A14Q7RTX9 510 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 DTX2Q86UW9 622 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 OR6V1Q8N148 313 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 LRRC18Q8N456 261 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 OR4K13Q8NH42 304 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 DNAJC9Q8WXX5 260 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 LRTOMTQ8WZ04 291 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 TSSK2Q96PF2 358 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 BDH2Q9BUT1 245 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 TSSK6Q9BXA6 273 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 GRIP2Q9C0E4 1043 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 RACGAP1Q9H0H5 632 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 TBC1D23Q9NUY8 699 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 CISD1Q9NZ45 108 aaKnown RBP16.58■□□□□ 0.24
DDX55-211ENST00000544429 ARID1AO14497 2285 aa16.58■□□□□ 0.24
DDX55-211ENST00000544429 TMCC2O75069 709 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 KHDRBS3O75525 346 aaKnown RBP16.57■□□□□ 0.24
DDX55-211ENST00000544429 SOD3P08294 240 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms