RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 OR2T4Q8NH00 348 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SPOCK3Q9BQ16 436 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NELFAQ9H3P2 528 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF226Q9NYT6 803 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 B9D1Q9UPM9 204 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 COA3Q9Y2R0 106 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 UGT2A1Q9Y4X1 527 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FKBP7Q9Y680 259 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FASNP49327 2511 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FAM171A2A8MVW0 826 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PRR23D1E9PI22 279 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DCTN6O00399 190 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HLA-DQA2P01906 255 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PRR23D2P0DMB1 279 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TUBA1BP68363 451 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TUBA4AP68366 448 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MRPS34P82930 218 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DBPQ10586 325 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PLBD1Q6P4A8 553 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C22orf34Q6ZV56 151 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TUBA1AQ71U36 451 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF627Q7L945 461 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZBTB46Q86UZ6 589 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GLB1L2Q8IW92 636 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NANOS1Q8WY41 292 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 BOD1Q96IK1 185 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 RDH12Q96NR8 316 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DACH2Q96NX9 599 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MBOAT4Q96T53 435 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DDOQ99489 341 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SH3GL3Q99963 347 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GRIP2Q9C0E4 1043 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 KCNN2Q9H2S1 579 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ICE1Q9Y2F5 2266 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PRKYO43930 277 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GYPBP06028 91 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CLUP10909 449 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 EPXP11678 715 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CD79AP11912 226 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MSR1P21757 451 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 LAP3P28838 519 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CDC42P60953 191 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GLO1Q04760 184 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NRN1LQ496H8 165 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C12orf73Q69YU5 71 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SSX8Q7RTT4 187 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC16A14Q7RTX9 510 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CCDC36Q8IYA8 594 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TCEANCQ8N8B7 351 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF555Q8NEP9 628 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR51L1Q8NGJ5 315 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FAM222BQ8WU58 562 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NRG4Q8WWG1 115 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HRASLS5Q96KN8 279 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C1QTNF6Q9BXI9 259 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 RACGAP1Q9H0H5 632 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MED20Q9H944 212 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SIAEQ9HAT2 523 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OBP2BQ9NPH6 170 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 IMPAD1Q9NX62 359 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GMPPBQ9Y5P6 360 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC25A15Q9Y619 301 aa12.67□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GCN1Q92616 2671 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ARPC4-TTLL3A0A0A6YYG9 625 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 IGLV1-36A0A0B4J1U3 117 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 M0R129 80 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TLX2O43763 284 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GPANK1O95872 356 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HLA-HP01893 362 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 THBDP07204 575 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SPI1P17947 270 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PYCR1P32322 319 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC25A1P53007 311 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PIGFQ07326 219 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FOXL2NBQ6ZUU3 175 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CXXC5Q7LFL8 322 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CPOQ8IVL8 374 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SKA3Q8IX90 412 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ACBD4Q8NC06 268 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR6K6Q8NGW6 343 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FAM81AQ8TBF8 368 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NABP1Q96AH0 204 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 IL4I1Q96RQ9 567 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 VCX3BQ9H321 246 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 RNF121Q9H920 327 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 EMC7Q9NPA0 242 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CCNB1IP1Q9NPC3 277 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HINT3Q9NQE9 182 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 POLE4Q9NR33 117 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FAM118AQ9NWS6 357 aa12.66□□□□□ -0.38
TNFRSF1A-216ENST00000543995 LOC100130705A0A1B0GUX0 176 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 UBL3O95164 117 aa12.65□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MPZL1O95297 269 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms