RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 DNM1P34Q6PK57 102 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 TUBA1AQ71U36 451 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 OR6V1Q8N148 313 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 SLC22A24Q8N4F4 322 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 FOXN4Q96NZ1 517 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 DDOQ99489 341 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 SEC61A2Q9H9S3 476 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 SRA1Q9HD15 236 aaKnown RBP11.92□□□□□ -0.5
SP140-213ENST00000543928 OBP2BQ9NPH6 170 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 KCNN3Q9UGI6 736 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 B9D1Q9UPM9 204 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 ARPC4-TTLL3A0A0A6YYG9 625 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 ZAR1LA6NP61 321 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 CASQ2O14958 399 aaPredicted RBP11.91□□□□□ -0.5
SP140-213ENST00000543928 SURF4O15260 269 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 FARS2O95363 451 aaKnown RBP11.91□□□□□ -0.5
SP140-213ENST00000543928 WNT11O96014 354 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 OR8G3PP0DMU2 310 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
SP140-213ENST00000543928 NPR2P20594 1047 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 CRYGSP22914 178 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
SP140-213ENST00000543928 CENPAP49450 140 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SLC34A1Q06495 639 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SGCAQ16586 387 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 ZIK1Q3SY52 487 aaPredicted RBP11.91□□□□□ -0.5
SP140-213ENST00000543928 NRN1LQ496H8 165 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SLX4IPQ5VYV7 408 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SEZ6L2Q6UXD5 910 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SSX8Q7RTT4 187 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SKA3Q8IX90 412 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 OR9Q1Q8NGQ5 310 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 NABP1Q96AH0 204 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 PLEKHA8Q96JA3 519 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 C1QTNF6Q9BXI9 259 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 RACGAP1Q9H0H5 632 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 SIAEQ9HAT2 523 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 RNPEPL1Q9HAU8 725 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 TVP23BQ9NYZ1 205 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 COA3Q9Y2R0 106 aaPredicted RBP11.91□□□□□ -0.5
SP140-213ENST00000543928 FKBP7Q9Y680 259 aa11.91□□□□□ -0.5
SP140-213ENST00000543928 IGLV1-36A0A0B4J1U3 117 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 ZNF503-AS2A6NEH8 195 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 FAM183AA6NL82 134 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 FAM171A2A8MVW0 826 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 MGRN1O60291 552 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 HLA-HP01893 362 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 LAP3P28838 519 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 DAZAP2Q15038 168 aaPredicted RBP11.9□□□□□ -0.5
SP140-213ENST00000543928 SNAPC1Q16533 368 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 C1QTNF12Q5T7M4 302 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 OGFRL1Q5TC84 451 aaPredicted RBP11.9□□□□□ -0.5
SP140-213ENST00000543928 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 SLC16A14Q7RTX9 510 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 ZBTB46Q86UZ6 589 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 GLB1L2Q8IW92 636 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 CCDC36Q8IYA8 594 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 LRRC18Q8N456 261 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 GALNT4Q8N4A0 578 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 NANOS1Q8WY41 292 aaKnown RBP11.9□□□□□ -0.5
SP140-213ENST00000543928 OTULINQ96BN8 352 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 SLC38A2Q96QD8 506 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 PRRG3Q9BZD7 231 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 NMNAT2Q9BZQ4 307 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 MED20Q9H944 212 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 NGBQ9NPG2 151 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 POLE4Q9NR33 117 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 ZNF224Q9NZL3 707 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 NPAP1Q9NZP6 1156 aa11.9□□□□□ -0.5
SP140-213ENST00000543928 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
SP140-213ENST00000543928 DEFB108AA8MXU0 73 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 SIAH2O43255 324 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 SNAP29O95721 258 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 GPANK1O95872 356 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 SCG5P05408 212 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 GYPBP06028 91 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 PATE4P0C8F1 98 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 CLUP10909 449 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 CD79AP11912 226 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 MSR1P21757 451 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 PAICSP22234 425 aaKnown RBP11.89□□□□□ -0.51
SP140-213ENST00000543928 PYCR1P32322 319 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 ZNF83P51522 516 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 SLC25A1P53007 311 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 PIGFQ07326 219 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 SLC36A2Q495M3 483 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 FAM27BQ5VT28 67 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 OTPQ5XKR4 325 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 C12orf73Q69YU5 71 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 MDP1Q86V88 176 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 PROKR2Q8NFJ6 384 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 OR51L1Q8NGJ5 315 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
SP140-213ENST00000543928 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms