RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 POU1F1P28069 291 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 PIGFQ07326 219 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 SPOCK1Q08629 439 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 PGGHGQ32M88 737 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 ZNF362Q5T0B9 420 aaPredicted RBP13.15□□□□□ -0.3
CD9-210ENST00000543916 MYPOPQ86VE0 399 aaPredicted RBP13.15□□□□□ -0.3
CD9-210ENST00000543916 CCDC36Q8IYA8 594 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 NPEPL1Q8NDH3 523 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 OR2T33Q8NG76 320 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 LURAP1Q96LR2 239 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 SNX18Q96RF0 628 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 RERGLQ9H628 205 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 SEC61A2Q9H9S3 476 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 PAPOLBQ9NRJ5 636 aaKnown RBP13.15□□□□□ -0.3
CD9-210ENST00000543916 CRNNQ9UBG3 495 aaPredicted RBP13.15□□□□□ -0.3
CD9-210ENST00000543916 IGLV1-36A0A0B4J1U3 117 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 OR6C68A6NDL8 312 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 RENP00797 406 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 IGLV1-44P01699 117 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 CD3EP07766 207 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 CELA3BP08861 270 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 CBR1P16152 277 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 CD40P25942 277 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 GRK5P34947 590 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 SGCAQ16586 387 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 GSG1Q2KHT4 349 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 KDM4DQ6B0I6 523 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 ACSM5Q6NUN0 579 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 ADAM5Q6NVV9 412 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 TMEM108Q6UXF1 575 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 ZNF704Q6ZNC4 412 aaPredicted RBP13.14□□□□□ -0.31
CD9-210ENST00000543916 LRRC18Q8N456 261 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 SLC37A3Q8NCC5 494 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 LILRB1Q8NHL6 650 aaPredicted RBP13.14□□□□□ -0.31
CD9-210ENST00000543916 NANOS1Q8WY41 292 aaKnown RBP13.14□□□□□ -0.31
CD9-210ENST00000543916 NRGNQ92686 78 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 ZNF75AQ96N20 296 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 DDOQ99489 341 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 PLEKHF2Q9H8W4 249 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 SIAEQ9HAT2 523 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
CD9-210ENST00000543916 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 TMEFF2Q9UIK5 374 aaPredicted RBP13.14□□□□□ -0.31
CD9-210ENST00000543916 BAIAP2Q9UQB8 552 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 COA3Q9Y2R0 106 aaPredicted RBP13.14□□□□□ -0.31
CD9-210ENST00000543916 RNF115Q9Y4L5 304 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 PDZD2O15018 2839 aa13.14□□□□□ -0.31
CD9-210ENST00000543916 ABCD4O14678 606 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 KHDRBS3O75525 346 aaKnown RBP13.13□□□□□ -0.31
CD9-210ENST00000543916 UBL3O95164 117 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 FARS2O95363 451 aaKnown RBP13.13□□□□□ -0.31
CD9-210ENST00000543916 GPANK1O95872 356 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 CECR9P0C854 216 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 NPR2P20594 1047 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 PTAFRP25105 342 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 PTDSS1P48651 473 aaKnown RBP13.13□□□□□ -0.31
CD9-210ENST00000543916 IDH3GP51553 393 aaPredicted RBP13.13□□□□□ -0.31
CD9-210ENST00000543916 RAB1AP62820 205 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 CDK5Q00535 292 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 NPRL3Q12980 569 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 CRMP1Q14194 572 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 GINS1Q14691 196 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 OTPQ5XKR4 325 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 SLC27A4Q6P1M0 643 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 SLC16A14Q7RTX9 510 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 OR6V1Q8N148 313 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 PARP8Q8N3A8 854 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 FAM169BQ8N8A8 192 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 KBTBD8Q8NFY9 601 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 STMN2Q93045 179 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 CIB1Q99828 191 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 LIME1Q9H400 295 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 SRA1Q9HD15 236 aaKnown RBP13.13□□□□□ -0.31
CD9-210ENST00000543916 POLE4Q9NR33 117 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 KLHL21Q9UJP4 597 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
CD9-210ENST00000543916 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 SHISA9B4DS77 424 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 MGRN1O60291 552 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 MPZL1O95297 269 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 MMP7P09237 267 aaPredicted RBP13.12□□□□□ -0.31
CD9-210ENST00000543916 ZNF14P17017 642 aaPredicted RBP13.12□□□□□ -0.31
CD9-210ENST00000543916 MSR1P21757 451 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 PAX7P23759 505 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 IGFBP5P24593 272 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 LAP3P28838 519 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 CRABP1P29762 137 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 ARR3P36575 388 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 GIPRP48546 466 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 CRISP1P54107 249 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 ENDOGQ14249 297 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms