RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	OR7A17	O14581	309 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TIMM23	O14925	209 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MPZL1	O95297	269 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	H6PD	O95479	791 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CH25H	O95992	272 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KNG1	P01042	644 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CRYAA	P02489	173 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HPX	P02790	462 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IL3	P08700	152 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ANPEP	P15144	967 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NPR2	P20594	1047 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MPI	P34949	423 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NUP62	P37198	522 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TMEM33	P57088	247 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TXNL4A	P83876	142 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NAAA	Q02083	359 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF117	Q03924	483 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HSPB3	Q12988	150 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PDZK1IP1	Q13113	114 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SELENBP1	Q13228	472 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IKZF1	Q13422	519 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GTF2H2	Q13888	395 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC36A3	Q495N2	470 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HIKESHI	Q53FT3	197 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DCAF12L2	Q5VW00	463 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM219B	Q5XKK7	198 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SAXO2	Q658L1	398 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GTF2H2C	Q6P1K8	395 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CCDC137	Q6PK04	289 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CBLN3	Q6UW01	205 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TMEM107	Q6UX40	140 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C17orf107	Q6ZR85	190 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MISP	Q8IVT2	679 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF679	Q8IYX0	411 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CMTM4	Q8IZR5	234 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C1orf52	Q8N6N3	182 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KIR3DL3	Q8N743	410 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EIF1AD	Q8N9N8	165 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SPERT	Q8NA61	448 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NUP37	Q8NFH4	326 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SUN5	Q8TC36	379 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LRRC8C	Q8TDW0	803 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CKAP2	Q8WWK9	683 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PIK3R3	Q92569	461 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TFAP2C	Q92754	450 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RDH5	Q92781	318 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	YIPF5	Q969M3	257 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MAGOHB	Q96A72	148 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EXOSC8	Q96B26	276 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PHF21B	Q96EK2	531 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BSCL2	Q96G97	398 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DCLRE1C	Q96SD1	692 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPR22	Q99680	433 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPA33	Q99795	319 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DPCD	Q9BVM2	203 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CADM1	Q9BY67	442 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	WNT5B	Q9H1J7	359 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TPK1	Q9H3S4	243 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF665	Q9H7R5	613 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GORASP2	Q9H8Y8	452 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SEC61A2	Q9H9S3	476 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DYNLRB1	Q9NP97	96 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RPRD1B	Q9NQG5	326 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC7A10	Q9NS82	523 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SMPD3	Q9NY59	655 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EMC3	Q9P0I2	261 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SENP1	Q9P0U3	644 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM96B	Q9Y3D0	163 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660		A0A1W2PQD3	144 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR6C68	A6NDL8	312 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660		E9PI62	339 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPR171	O14626	319 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DNALI1	O14645	258 aa	Predicted RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPIH	O43447	177 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MRPL33	O75394	65 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RP2	O75695	350 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MFN2	O95140	757 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ESRRB	O95718	433 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PTBP3	O95758	552 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PDYN	P01213	254 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IGLV1-44	P01699	117 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CECR9	P0C854	216 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LYL1	P12980	280 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ANXA8	P13928	327 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SELE	P16581	610 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ANXA7	P20073	488 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GATA3	P23771	443 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PRPH2	P23942	346 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MPG	P29372	298 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TYK2	P29597	1187 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NCBP2	P52298	156 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PRRX1	P54821	245 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SUMO2	P61956	95 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RAE1	P78406	368 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MRPS11	P82912	194 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TGFBR3	Q03167	851 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	REL	Q04864	619 aa	Predicted RBP	4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ACSM1	Q08AH1	577 aa		4.11	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TRAF3	Q13114	568 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms