RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 FAM183AA6NL82 134 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 TLX2O43763 284 aaPredicted RBP15.01□□□□□ -0.01
LIG1-204ENST00000542460 PRKYO43930 277 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 SEC14L2O76054 403 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 OR8G3PP0DMU2 310 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 LAP3P28838 519 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 HOXC12P31275 282 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 TBRG1Q3YBR2 411 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 HIKESHIQ53FT3 197 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 TIMM23BQ5SRD1 257 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 C1QTNF12Q5T7M4 302 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 PLBD1Q6P4A8 553 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 CPOQ8IVL8 374 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 GLB1L2Q8IW92 636 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 SLC22A24Q8N4F4 322 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 DHRSXQ8N5I4 330 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 TCEANCQ8N8B7 351 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 OR9Q1Q8NGQ5 310 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 TRUB1Q8WWH5 349 aaKnown RBP15.01□□□□□ -0.01
LIG1-204ENST00000542460 HSD17B8Q92506 261 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 PITX2Q99697 317 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 SIAEQ9HAT2 523 aa15.01□□□□□ -0.01
LIG1-204ENST00000542460 A0A1W2PPL8 197 aa15□□□□□ -0.01
LIG1-204ENST00000542460 A1L4Q6 167 aa15□□□□□ -0.01
LIG1-204ENST00000542460 TUBAL3A6NHL2 446 aa15□□□□□ -0.01
LIG1-204ENST00000542460 FARS2O95363 451 aaKnown RBP15□□□□□ -0.01
LIG1-204ENST00000542460 SPI1P17947 270 aa15□□□□□ -0.01
LIG1-204ENST00000542460 IGFBP2P18065 325 aa15□□□□□ -0.01
LIG1-204ENST00000542460 CDAP32320 146 aa15□□□□□ -0.01
LIG1-204ENST00000542460 CENPAP49450 140 aa15□□□□□ -0.01
LIG1-204ENST00000542460 GLO1Q04760 184 aa15□□□□□ -0.01
LIG1-204ENST00000542460 KEAP1Q14145 624 aa15□□□□□ -0.01
LIG1-204ENST00000542460 SGCAQ16586 387 aa15□□□□□ -0.01
LIG1-204ENST00000542460 TTC23Q5W5X9 447 aa15□□□□□ -0.01
LIG1-204ENST00000542460 FOXL2NBQ6ZUU3 175 aa15□□□□□ -0.01
LIG1-204ENST00000542460 CXXC5Q7LFL8 322 aaKnown RBP15□□□□□ -0.01
LIG1-204ENST00000542460 SSX8Q7RTT4 187 aa15□□□□□ -0.01
LIG1-204ENST00000542460 CCDC36Q8IYA8 594 aa15□□□□□ -0.01
LIG1-204ENST00000542460 PROKR2Q8NFJ6 384 aa15□□□□□ -0.01
LIG1-204ENST00000542460 OR8J1Q8NGP2 316 aa15□□□□□ -0.01
LIG1-204ENST00000542460 FAM81AQ8TBF8 368 aa15□□□□□ -0.01
LIG1-204ENST00000542460 TMEM163Q8TC26 289 aa15□□□□□ -0.01
LIG1-204ENST00000542460 MUCL1Q96DR8 90 aa15□□□□□ -0.01
LIG1-204ENST00000542460 HCAR1Q9BXC0 346 aa15□□□□□ -0.01
LIG1-204ENST00000542460 RASSF4Q9H2L5 321 aa15□□□□□ -0.01
LIG1-204ENST00000542460 NELFAQ9H3P2 528 aa15□□□□□ -0.01
LIG1-204ENST00000542460 MED20Q9H944 212 aa15□□□□□ -0.01
LIG1-204ENST00000542460 HINT3Q9NQE9 182 aaKnown RBP15□□□□□ -0.01
LIG1-204ENST00000542460 SLC17A5Q9NRA2 495 aa15□□□□□ -0.01
LIG1-204ENST00000542460 IMPAD1Q9NX62 359 aa15□□□□□ -0.01
LIG1-204ENST00000542460 SPTBN1Q01082 2364 aaKnown RBP14.99□□□□□ -0.01
LIG1-204ENST00000542460 DBPQ10586 325 aaPredicted RBP14.99□□□□□ -0.01
LIG1-204ENST00000542460 SNTB1Q13884 538 aaKnown RBP14.99□□□□□ -0.01
LIG1-204ENST00000542460 FAM27BQ5VT28 67 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 KLHL24Q6TFL4 600 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 DMRTC2Q8IXT2 367 aaPredicted RBP14.99□□□□□ -0.01
LIG1-204ENST00000542460 DEPDC4Q8N2C3 294 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 LINC01560Q8TB33 94 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 CYGBQ8WWM9 190 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 NABP1Q96AH0 204 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 WFIKKN1Q96NZ8 548 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 PSMG3-AS1Q96PY0 264 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 IL4I1Q96RQ9 567 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 MED18Q9BUE0 208 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 ADI1Q9BV57 179 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 OBP2BQ9NPH6 170 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 MOKQ9UQ07 419 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 AMDHD2Q9Y303 409 aa14.99□□□□□ -0.01
LIG1-204ENST00000542460 USP9YO00507 2555 aaPredicted RBP14.99□□□□□ -0.01
LIG1-204ENST00000542460 ARPC4-TTLL3A0A0A6YYG9 625 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 FAM171A2A8MVW0 826 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 H0YAE9 185 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 M0R129 80 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 PRODHO43272 600 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 GYPBP06028 91 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 CLUP10909 449 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 MSR1P21757 451 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 VHLP40337 213 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 BLVRAP53004 296 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 UBE2NP61088 152 aaKnown RBP14.98□□□□□ -0.01
LIG1-204ENST00000542460 TAB1Q15750 504 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 C22orf34Q6ZV56 151 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 SKA3Q8IX90 412 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 WDR31Q8NA23 367 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 ACBD4Q8NC06 268 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 OR52N5Q8NH56 324 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 HTRA1Q92743 480 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 FOXN4Q96NZ1 517 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 SH3GL3Q99963 347 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 OR51V1Q9H2C8 321 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 POLE4Q9NR33 117 aa14.98□□□□□ -0.01
LIG1-204ENST00000542460 SH3D21A4FU49 640 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 WNT11O96014 354 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 HLA-DQA2P01906 255 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 PAX7P23759 505 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 PYCR1P32322 319 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 KIR2DL3P43628 341 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 CAPZA2P47755 286 aa14.97□□□□□ -0.01
LIG1-204ENST00000542460 AQP4P55087 323 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms