RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MRAPQ8TCY5 172 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 HSD17B8Q92506 261 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 BIRC7Q96CA5 298 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 NXPE2Q96DL1 559 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 PGLYRP2Q96PD5 576 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 TNFRSF13CQ96RJ3 184 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 CPXM1Q96SM3 734 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 APOL2Q9BQE5 337 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 URM1Q9BTM9 101 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 ULBP2Q9BZM5 246 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 UBXN6Q9BZV1 441 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 NXF5Q9H1B4 397 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 SYT4Q9H2B2 425 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 OR51M1Q9H341 326 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 FAM49BQ9NUQ9 324 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 DUS2Q9NX74 493 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 CMTM6Q9NX76 183 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 NXT1Q9UKK6 140 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.78□□□□□ -1.64
DDB1-219ENST00000541513 AMDHD2Q9Y303 409 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 ALG6Q9Y672 507 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SPTBN5Q9NRC6 3674 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 MYOFQ9NZM1 2061 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 A0A1B0GUS0 222 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 GNG14A0A1W2PPG7 69 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 FAM92AA1XBS5 289 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 LRIT2A6NDA9 550 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ZNF503-AS2A6NEH8 195 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 LILRA5A6NI73 299 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ERI2A8K979 691 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 SMLR1H3BR10 107 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 TM9SF1O15321 606 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 CCL16O15467 120 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 PSTPIP1O43586 416 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 AP2A1O95782 977 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 GYPCP04921 128 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ATP1A1P05023 1023 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 TFAP2AP05549 437 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 KLK1P06870 262 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 TFPTP0C1Z6 253 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 IGHV4-31P0DP07 118 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 PGAM1P18669 254 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 LHCGRP22888 699 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 IVDP26440 423 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 HTR2CP28335 458 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ADORA2BP29275 332 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 KDELR2P33947 212 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 MAP3K8P41279 467 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 BDKRB1P46663 353 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 RPL34P49207 117 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 GP2P55259 537 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 NUP107P57740 925 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 AP3S2P59780 193 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ERVK11-1P61568 191 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 POU3F1Q03052 451 aaPredicted RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 C2orf54Q08AI8 447 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 RIPPLY1Q0D2K3 151 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 TWF1Q12792 350 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
DDB1-219ENST00000541513 PON3Q15166 354 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 SAMD4BQ5PRF9 694 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 SEL1L2Q5TEA6 688 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 KHDRBS2Q5VWX1 349 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 ATRAIDQ6UW56 229 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 PRSS57Q6UWY2 283 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 BTNL3Q6UXE8 466 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 C4orf22Q6V702 233 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 HACD2Q6Y1H2 254 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 C19orf35Q6ZS72 473 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 CLEC20AQ6ZU45 233 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 CLIP4Q8N3C7 705 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 GVQW1Q8N7I0 195 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 C15orf54Q8N8G6 183 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 OR5M9Q8NGP3 310 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 OR1B1Q8NGR6 318 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 OSR1Q8TAX0 266 aaPredicted RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 CA5BP1Q8WTZ4 195 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ACOT11Q8WXI4 607 aaPredicted RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 TM9SF4Q92544 642 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 PSMG2Q969U7 264 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 CPNE4Q96A23 557 aaPredicted RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 RNF170Q96K19 258 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 HSFY1Q96LI6 401 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 UCK2Q9BZX2 261 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 SLC25A19Q9HC21 320 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 ANKHQ9HCJ1 492 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 VCX3AQ9NNX9 186 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 A4GALTQ9NPC4 353 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 TMEM30AQ9NV96 361 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 SCML2Q9UQR0 700 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 EXOSC1Q9Y3B2 195 aaKnown RBP4.77□□□□□ -1.65
DDB1-219ENST00000541513 AUP1Q9Y679 476 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 R4GN57 208 aa4.77□□□□□ -1.65
DDB1-219ENST00000541513 NCANO14594 1321 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 CLUHO75153 1309 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 MYO18AQ92614 2054 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 CENPVL1A0A0U1RR11 272 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 A0A1W2PRF3 423 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 A0A1W2PRM7 423 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 BLOC1S5-TXNDC5H3BN57 136 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms