RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 TGM4P49221 684 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 P2RY4P51582 365 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 PLGLB1Q02325 96 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 POU3F1Q03052 451 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-204ENST00000540846 C19orf57Q0VDD7 668 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 MELKQ14680 651 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 CDK5R1Q15078 307 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 CCDC58Q4VC31 144 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 RAET1LQ5VY80 246 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 RPL22L1Q6P5R6 122 aaKnown RBP11.12□□□□□ -0.63
SMAD3-204ENST00000540846 RPTNQ6XPR3 784 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 BTLAQ7Z6A9 289 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 SLC22A16Q86VW1 577 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 NEIL3Q8TAT5 605 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 PNPLA2Q96AD5 504 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 OR5B2Q96R09 309 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 INTS14Q96SY0 518 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 SLC6A15Q9H2J7 730 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 OCEL1Q9H607 264 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 WDR76Q9H967 626 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 B3GAT1Q9P2W7 334 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 GNG8Q9UK08 70 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 NPIPA1Q9UND3 350 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 TRAPPC4Q9Y296 219 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 GRIP1Q9Y3R0 1128 aa11.12□□□□□ -0.63
SMAD3-204ENST00000540846 TVP23AA6NH52 213 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CD8B2A6NJW9 211 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SEC14L5O43304 696 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 IGHG3P01860 377 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CLEC2LP0C7M8 214 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CD8BP10966 210 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 IFNGR1P15260 489 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CTLA4P16410 223 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF24P17028 368 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CRABP1P29762 137 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SIRPAP78324 504 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 RUNX1T1Q06455 604 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 MRPL28Q13084 256 aaKnown RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 HNRNPA0Q13151 305 aaKnown RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 C16orf87Q6PH81 154 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 NHLRC1Q6VVB1 395 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 PLEKHG7Q6ZR37 379 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SLC35D2Q76EJ3 337 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 KCTD20Q7Z5Y7 419 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 KDM8Q8N371 416 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 MS4A15Q8N5U1 240 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 OR14L1PQ8NHC6 308 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 HAVCR2Q8TDQ0 301 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 MIB2Q96AX9 1013 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 PIGQQ9BRB3 760 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 LUZP4Q9P127 313 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 KLHL13Q9P2N7 655 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 TMEM14AQ9Y6G1 99 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ALPK2Q86TB3 2170 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ACOT7O00154 380 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 PHYHO14832 338 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 MAGEB4O15481 346 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 TRAPPC6AO75865 159 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 PMS2P2O95744 297 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ABHD16AO95870 558 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ALOX5APP20292 161 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CD40LGP29965 261 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SFTPDP35247 375 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 MTNR1BP49286 362 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 GDI2P50395 445 aaKnown RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 CLDN15P56746 228 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 OR2B6P58173 313 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF45Q02386 682 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 MXD1Q05195 221 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SLC3A1Q07837 685 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 INSL4Q14641 139 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 TOMM20Q15388 145 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 DNM1P34Q6PK57 102 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 GGNQ86UU5 652 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 OR6N2Q8NGY6 317 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 FNDC8Q8TC99 324 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 GHSRQ92847 366 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 WDFY2Q96P53 400 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SH3GL3Q99963 347 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 KCNS3Q9BQ31 491 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 TSPAN10Q9H1Z9 355 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
SMAD3-204ENST00000540846 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-204ENST00000540846 SPTA1P02549 2419 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 LOC102725191A0A1B0GVB3 256 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 A0A1W2PNR3 127 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 SHISA3A0PJX4 238 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 AQP7P3A6NL99 342 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 HSPB2A8KAH6 182 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 DVL2O14641 736 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 CASKO14936 926 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 TRAF3IP2O43734 574 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-204ENST00000540846 GPRIN2O60269 458 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 SLC16A7O60669 478 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms