RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 Q6ZS92 163 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 TUBA1AQ71U36 451 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 GATAD2BQ8WXI9 593 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 MRPL48Q96GC5 212 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 INTS14Q96SY0 518 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 RERGLQ9H628 205 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 LDAHQ9H6V9 325 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF71Q9NQZ8 489 aaPredicted RBP12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF407Q9C0G0 2248 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 TVP23AA6NH52 213 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF670-ZNF695F2Z2N8 137 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 MKRN2OSH3BPM6 223 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 PHYHO14832 338 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 MT-ND5P03915 603 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 FMODQ06828 376 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 TPBGQ13641 420 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ETFDHQ16134 617 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 CTF1Q16619 201 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 CDONQ4KMG0 1287 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 SSX6Q7RTT6 188 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 SYS1Q8N2H4 156 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 SMAP2Q8WU79 429 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 UFD1Q92890 307 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF385AQ96PM9 386 aaKnown RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 EXO5Q9H790 373 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 WDR76Q9H967 626 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 SIAEQ9HAT2 523 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 FLVCR1Q9Y5Y0 555 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 TMEM14AQ9Y6G1 99 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 DNAJC13O75165 2243 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 RP1L1Q8IWN7 2480 aaPredicted RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 IGKV1D-43A0A0B4J1Z2 117 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 K7EM74 188 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF432O94892 652 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ATE1O95260 518 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 HLA-DQA2P01906 255 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 PDGFAP04085 211 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 HRGP04196 525 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 CPN1P15169 458 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 PCSK6P29122 969 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 UGT2B10P36537 528 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 SERPINB10P48595 397 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 HCCSP53701 268 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 SRYQ05066 204 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 PHC2Q8IXK0 858 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 RFLNBQ8N5W9 214 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ZIC4Q8N9L1 334 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 INTS12Q96CB8 462 aaKnown RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 OR2M2Q96R28 347 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 ISG20L2Q9H9L3 353 aaKnown RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 TRIM36Q9NQ86 728 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 BABAM2Q9NXR7 383 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 RCE1Q9Y256 329 aa12.65□□□□□ -0.38
CYB561A3-216ENST00000540755 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 A0A1B0GVC2 190 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 AIREO43918 545 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 SYNGR4O95473 234 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 GPANK1O95872 356 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 LALBAP00709 142 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 GAAP10253 952 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 GADD45AP24522 165 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 PEX19P40855 299 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 ENTPD1P49961 510 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 ZNF133P52736 654 aaPredicted RBP12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 TAS2R43P59537 309 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 RASGEF1BQ0VAM2 473 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 GPR50Q13585 617 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 INAQ16352 499 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 RPUSD3Q6P087 351 aaKnown RBP12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 SLC25A47Q6Q0C1 308 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 VASH1Q7L8A9 365 aaPredicted RBP12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 KLBQ86Z14 1044 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 TMEM123Q8N131 208 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 RBMXL3Q8N7X1 1067 aaKnown RBP12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 SLC26A10Q8NG04 563 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 RNF128Q8TEB7 428 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 SNX33Q8WV41 574 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
CYB561A3-216ENST00000540755 C4orf36Q96KX1 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms