RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 HIST3H3Q16695 136 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 FAM209AQ5JX71 171 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 TMEM154Q6P9G4 183 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 MAVSQ7Z434 540 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 DPPA2Q7Z7J5 298 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 OR6N1Q8NGY5 312 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 DNAJC9Q8WXX5 260 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 POP5Q969H6 163 aaKnown RBP6.18□□□□□ -1.42
YBX3-209ENST00000540747 SLC47A1Q96FL8 570 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ITCHQ96J02 903 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ZBTB18Q99592 522 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 EPYCQ99645 322 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 SH3GL3Q99963 347 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 THTPAQ9BU02 230 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ASPNQ9BXN1 380 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 BCL2L14Q9BZR8 327 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 C1orf198Q9H425 327 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 DDX28Q9NUL7 540 aaKnown RBP6.18□□□□□ -1.42
YBX3-209ENST00000540747 PLEK2Q9NYT0 353 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 TAS2R5Q9NYW4 299 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 SLC25A37Q9NYZ2 338 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 GLTPQ9NZD2 209 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ZIM2Q9NZV7 527 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ARMCX1Q9P291 453 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 RPS6KB2Q9UBS0 482 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 TANC2Q9HCD6 1990 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 DNAH3Q8TD57 4116 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 TRBV5-3A0A0A0MS03 114 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 ZSCAN5BA6NJL1 495 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 ZNF726A6NNF4 738 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 A8MXK9 166 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 F5H0A9 414 aaPredicted RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 TRAPPC2LH3BP13 241 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 HDAC3O15379 428 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 SLC22A3O75751 556 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MT-ATP6P00846 226 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 IGHV2-70P01814 119 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 THY1P04216 161 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 CD55P08174 381 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 IDO1P14902 403 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 ACADSP16219 412 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 PRDX6P30041 224 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 WNT5AP41221 380 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MRPL19P49406 292 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 IDH3AP50213 366 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 CDH12P55289 794 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 BIDP55957 195 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 IL13RA1P78552 427 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 LCN2P80188 198 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 PAX2Q02962 417 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 RBBP4Q09028 425 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 HNRNPA0Q13151 305 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 RCN1Q15293 331 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 OR1Q1Q15612 314 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MIDNQ504T8 468 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 SPRNQ5BIV9 151 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 LRIF1Q5T3J3 769 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 C9orf139Q6ZV77 190 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 SLC35D2Q76EJ3 337 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 RETREG3Q86VR2 466 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 TSPYL5Q86VY4 417 aaPredicted RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 TREML1Q86YW5 311 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 ZNF101Q8IZC7 436 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 BCL6BQ8N143 479 aaPredicted RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 CPEB3Q8NE35 698 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 OR4K5Q8NGD3 323 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 OR9I1Q8NGQ6 314 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 OR5J2Q8NH18 312 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 SNX33Q8WV41 574 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 C11orf40Q8WZ69 217 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 RAB1CQ92928 201 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 DACT3Q96B18 629 aaPredicted RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 NMD3Q96D46 503 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 CMTM5Q96DZ9 223 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 ELMOD3Q96FG2 381 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MARS2Q96GW9 593 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 SLC25A44Q96H78 314 aaPredicted RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 ZNF426Q9BUY5 554 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MRPL13Q9BYD1 178 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 SAP30LQ9HAJ7 183 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MMP26Q9NRE1 261 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 DCAF16Q9NXF7 216 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 KLHL21Q9UJP4 597 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 PURGQ9UJV8 347 aaKnown RBP6.17□□□□□ -1.42
YBX3-209ENST00000540747 NUP50Q9UKX7 468 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 MMP24Q9Y5R2 645 aa6.17□□□□□ -1.42
YBX3-209ENST00000540747 RYR3Q15413 4870 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 LOC100509620A0A075B734 347 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 TMEM247A6NEH6 219 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 CLIC1O00299 241 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 FMO6PO60774 539 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 FKBP6O75344 327 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 FOXH1O75593 365 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 KRT36O76013 467 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 BAG2O95816 211 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 IGHMP01871 453 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 LCKP06239 509 aa6.16□□□□□ -1.42
YBX3-209ENST00000540747 ASAH2BP0C7U1 165 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms