RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 UBE2UQ5VVX9 321 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 OTPQ5XKR4 325 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 NSUN5P2Q63ZY6 315 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 NUFIP2Q7Z417 695 aaKnown RBP14.29□□□□□ -0.12
TRAF3-204ENST00000539721 SLC26A10Q8NG04 563 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 OR10H5Q8NGA6 315 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 ALG8Q9BVK2 526 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 YIPF3Q9GZM5 350 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 SLCO5A1Q9H2Y9 848 aa14.29□□□□□ -0.12
TRAF3-204ENST00000539721 PRRC2CQ9Y520 2896 aaKnown RBP14.28□□□□□ -0.12
TRAF3-204ENST00000539721 A0A1W2PQL4 384 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-204ENST00000539721 TMEM129A0AVI4 362 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 CD8B2A6NJW9 211 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF670-ZNF695F2Z2N8 137 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 KRT33AO76009 404 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 INMTO95050 263 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF823P16415 610 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 PSMB9P28065 219 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ENTPD1P49961 510 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF84P51523 738 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF85Q03923 595 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 GALEQ14376 348 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 MED22Q15528 200 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 C1orf185Q5T7R7 199 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 TSPO2Q5TGU0 170 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF367Q7RTV3 350 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 SATL1Q86VE3 508 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 CDC20BQ86Y33 519 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF100Q8IYN0 542 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 KLHL36Q8N4N3 616 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 C9orf106Q8NAJ2 232 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 APH1AQ96BI3 265 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ALKBH3Q96Q83 286 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-204ENST00000539721 OR5M11Q96RB7 305 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF649Q9BS31 505 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 RBM24Q9BX46 236 aaKnown RBP14.28□□□□□ -0.12
TRAF3-204ENST00000539721 BATF3Q9NR55 127 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 COPS3Q9UNS2 423 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 ARHGAP21Q5T5U3 1957 aa14.28□□□□□ -0.12
TRAF3-204ENST00000539721 OR6C65A6NJZ3 312 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 ZNF593O00488 134 aaPredicted RBP14.27□□□□□ -0.12
TRAF3-204ENST00000539721 HRGP04196 525 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 SPARCP09486 303 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 EDNRAP25101 427 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 CDAP32320 146 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 RPS27P42677 84 aaKnown RBP14.27□□□□□ -0.12
TRAF3-204ENST00000539721 GUCA1AP43080 201 aaPredicted RBP14.27□□□□□ -0.12
TRAF3-204ENST00000539721 RAB39AQ14964 217 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 OR2G6Q5TZ20 316 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 OR2A2Q6IF42 318 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 DPY19L4Q7Z388 723 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 RFLNBQ8N5W9 214 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 C11orf40Q8WZ69 217 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 TMIGD2Q96BF3 282 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 MNTQ99583 582 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 TM9SF2Q99805 663 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 TTTY10Q9BZA0 68 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 LINC00470Q9BZP3 86 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 C12orf49Q9H741 205 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 CRLF2Q9HC73 371 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 LAMP5Q9UJQ1 280 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 LSM2Q9Y333 95 aaKnown RBP14.27□□□□□ -0.12
TRAF3-204ENST00000539721 UGT2A1Q9Y4X1 527 aa14.27□□□□□ -0.12
TRAF3-204ENST00000539721 TLN1Q9Y490 2541 aaKnown RBP14.27□□□□□ -0.12
TRAF3-204ENST00000539721 DOCK7Q96N67 2140 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 DPPA5A6NC42 116 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 PRRG2O14669 202 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 IGHV3-9P01782 118 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 CD79BP40259 229 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 GP2P55259 537 aaKnown RBP14.27□□□□□ -0.13
TRAF3-204ENST00000539721 WNT4P56705 351 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 SIRPAP78324 504 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 RIPPLY2Q5TAB7 128 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 PCSK4Q6UW60 755 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 TMPRSS11AQ6ZMR5 421 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 SSX6Q7RTT6 188 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 GPR141Q7Z602 305 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 CNTNAP3BQ96NU0 1288 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 CNTNAP3Q9BZ76 1288 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 GPR35Q9HC97 309 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 SLC7A10Q9NS82 523 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 UPB1Q9UBR1 384 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 CAB39Q9Y376 341 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-204ENST00000539721 EMC9Q9Y3B6 208 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 TMEM14AQ9Y6G1 99 aa14.27□□□□□ -0.13
TRAF3-204ENST00000539721 ACACBO00763 2458 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 PKD1L2Q7Z442 2459 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 PHF3Q92576 2039 aaKnown RBP14.26□□□□□ -0.13
TRAF3-204ENST00000539721 MBD3L4A6NDZ8 208 aaPredicted RBP14.26□□□□□ -0.13
TRAF3-204ENST00000539721 MBD3L3A6NE82 208 aaPredicted RBP14.26□□□□□ -0.13
TRAF3-204ENST00000539721 MBD3L5A6NJ08 208 aaPredicted RBP14.26□□□□□ -0.13
TRAF3-204ENST00000539721 SCG5P05408 212 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 HOXD4P09016 255 aaPredicted RBP14.26□□□□□ -0.13
TRAF3-204ENST00000539721 HSMCR30P0CW71 290 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 PSKH1P11801 424 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 EDN3P14138 238 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 ROR2Q01974 943 aaKnown RBP14.26□□□□□ -0.13
TRAF3-204ENST00000539721 RBPJQ06330 500 aa14.26□□□□□ -0.13
TRAF3-204ENST00000539721 SPHARQ15513 63 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms