RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 LIPHQ8WWY8 451 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ELF4Q99607 663 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 NUDT9Q9BW91 350 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TCEAL2Q9H3H9 227 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TBC1D29Q9UFV1 150 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 C19orf53Q9UNZ5 99 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SSUH2Q9Y2M2 353 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ZFC3H1O60293 1989 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 LRP5O75197 1615 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF732B4DXR9 585 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 H7C1C5 153 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 PHF1O43189 567 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 GLB1P16278 677 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF26P17031 533 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 HSF1Q00613 529 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 HNF4GQ14541 408 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SMAD2Q15796 467 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ANGPTL5Q86XS5 388 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 KMT5CQ86Y97 462 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 LINC00346Q8IVM7 164 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 OR13C9Q8NGT0 318 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RASD2Q96D21 266 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 THOC3Q96J01 351 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 KIRREL1Q96J84 757 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 CTRCQ99895 268 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 POFUT1Q9H488 388 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 BCO1Q9HAY6 547 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 COQ3Q9NZJ6 369 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RBBP6Q7Z6E9 1792 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 COL11A1P12107 1806 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TSTD3H0UI37 97 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 K7ESM1 405 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 FADS1O60427 444 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SELENOFO60613 162 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TPPPO94811 219 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RPS23P62266 143 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 NHSL2Q5HYW2 709 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SHEQ5VZ18 495 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 DLEU7Q6UYE1 221 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 OR10J5Q8NHC4 309 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SLC25A46Q96AG3 418 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ZPBPQ9BS86 351 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SAMD10Q9BYL1 202 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SPACA1Q9HBV2 294 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 MBNL1Q9NR56 388 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 A3GALT2U3KPV4 340 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TMEM129A0AVI4 362 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RFXAPO00287 272 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TCRBP04435 133 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SRFP11831 508 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 B3GLCTQ6Y288 498 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RPS19BP1Q86WX3 136 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TDHQ8IZJ6 230 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 GCNT2Q8N0V5 402 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 CCDC74AQ96AQ1 378 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 APH1AQ96BI3 265 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TEX37Q96LM6 180 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RTL8AQ9BWD3 113 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 GABARAPL1Q9H0R8 117 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 KLF13Q9Y2Y9 288 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 MTCL1Q9Y4B5 1905 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ARRDC5A6NEK1 342 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 PLRG1O43660 514 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 CLDN1O95832 211 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 BMP1P13497 986 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 PRPH2P23942 346 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 MMP11P24347 488 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 NFYBP25208 207 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SUB1P53999 127 aaKnown RBP eCLIP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 UBE2KP61086 200 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 BTG1P62324 171 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF750Q32MQ0 723 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 Q6ZPB1 254 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 GDPD3Q7L5L3 318 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 TMPRSS7Q7RTY8 843 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 KANSL1Q7Z3B3 1105 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 BAHD1Q8TBE0 780 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 WFDC5Q8TCV5 224 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 PDXPQ96GD0 296 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SLC6A17Q9H1V8 727 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 POLDIP2Q9Y2S7 368 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SDK1Q7Z5N4 2213 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SCN3AQ9NY46 2000 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 A0A087WZY1 265 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 HSD17B6O14756 317 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 FABP1P07148 127 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 CD22P20273 847 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ARNTP27540 789 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 RPL35P42766 123 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 CCSMST1Q4G0I0 132 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 FAM109AQ8N4B1 249 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 SLC16A11Q8NCK7 471 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 PLPP5Q8NEB5 264 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ST8SIA1Q92185 356 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 H1FXQ92522 213 aaKnown RBP5.95□□□□□ -1.46
LSAMP-207ENST00000539563 DCBLD2Q96PD2 775 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 S1PR5Q9H228 398 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 AGAP14A8MT82 685 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 FBXO24O75426 580 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms