RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FGF2P09038 288 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 DLX5P56178 289 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 AP3S2P59780 193 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 SKP2Q13309 424 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 OR7A5Q15622 319 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF74Q16587 644 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 CLVS2Q5SYC1 327 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 OVCH1Q7RTY7 1134 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 CD163Q86VB7 1156 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC43A2Q8N370 569 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF676Q8N7Q3 588 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 TMEM106AQ96A25 262 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 CPNE2Q96FN4 548 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ALG12Q9BV10 488 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 POFUT1Q9H488 388 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 LDAHQ9H6V9 325 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 FRRS1LQ9P0K9 344 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 GMEB2Q9UKD1 530 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF281Q9Y2X9 895 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC6A5Q9Y345 797 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 DMDP11532 3685 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ECDO95905 644 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 CCR5P51681 352 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 SERTAD2Q14140 314 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 GAS6Q14393 721 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PRAMEF17Q5VTA0 474 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 HACD4Q5VWC8 232 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 NKAIN2Q5VXU1 208 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 CDH26Q8IXH8 852 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 DND1Q8IYX4 353 aaKnown RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 KTI12Q96EK9 354 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 LRFN5Q96NI6 719 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF285Q96NJ3 590 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 GPX7Q96SL4 187 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 NXF5Q9H1B4 397 aaKnown RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 WDR76Q9H967 626 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 A0A1W2PPC4 97 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PRAF2O60831 178 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 IGLV3-19P01714 112 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF28P17035 718 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 CAPZBP47756 277 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 RAG2P55895 527 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 RHOUQ7L0Q8 258 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 DPY19L4Q7Z388 723 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 SMRP1Q8NCR6 262 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PXT1Q8NFP0 134 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 OR4S1Q8NGB4 309 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 OR6N2Q8NGY6 317 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PNPLA2Q96AD5 504 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 TCTN2Q96GX1 697 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF578Q96N58 590 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 C7orf50Q9BRJ6 194 aaKnown RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 TINAGL1Q9GZM7 467 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 C8orf33Q9H7E9 229 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 MRM2Q9UI43 246 aaKnown RBP11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 VPS13AQ96RL7 3174 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 C17orf105B2RV13 164 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 ACOT7O00154 380 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 CLDN4O14493 209 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 UPK3AO75631 287 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 GLCEO94923 617 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 CD1CP29017 333 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC37A1P57057 533 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 GUCA2BQ16661 112 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 DMRTC1Q5HYR2 192 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PRR22Q8IZ63 422 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 PHOSPHO1Q8TCT1 267 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 KLHDC7BQ96G42 594 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 TGM7Q96PF1 710 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 LPAR4Q99677 370 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 DPYSL5Q9BPU6 564 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 TPSD1Q9BZJ3 242 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 ATG5Q9H1Y0 275 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 MMP25Q9NPA2 562 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 LANCL2Q9NS86 450 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC39A1Q9NY26 324 aa11.35□□□□□ -0.59
SFSWAP-208ENST00000539506 FITM1A5D6W6 292 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF749O43361 778 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ALOX12BO75342 701 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 OR2A4O95047 310 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 PLGP00747 810 aaPredicted RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 CD1AP06126 327 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ASAH2BP0C7U1 165 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 C4BPBP20851 252 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 SRSF3P84103 164 aaKnown RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ARHGAP40Q5TG30 622 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 C1QL3Q5VWW1 255 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC36A1Q7Z2H8 476 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 OR5M9Q8NGP3 310 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 TSLPQ969D9 159 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 HAVCR1Q96D42 359 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms