RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MVB12AQ96EY5 273 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 ARRDC1-AS1Q9H2J1 176 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 SLC2A1P11166 492 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 DPPA2Q7Z7J5 298 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 BCORP1Q8N888 145 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 OR52I1Q8NGK6 324 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 MFRPQ9BY79 579 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 METTL17Q9H7H0 456 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-205ENST00000538291 DSCR3O14972 297 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 CHRM2P08172 466 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 ACHEP22303 614 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 SSTR2P30874 369 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 PPICP45877 212 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 RSPO2Q6UXX9 243 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-205ENST00000538291 CISD2Q8N5K1 135 aaKnown RBP15.41■□□□□ 0.06
SCARB1-205ENST00000538291 HPSE2Q8WWQ2 592 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 LYSMD1Q96S90 227 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 EMC6Q9BV81 110 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 GNB4Q9HAV0 340 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 POLDIP2Q9Y2S7 368 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 ST6GAL1P15907 406 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 ARR3P36575 388 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 ZNF468Q5VIY5 522 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-205ENST00000538291 KANSL1Q7Z3B3 1105 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 PLPP7Q8NBV4 271 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 PFN4Q8NHR9 129 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 NIPSNAP1Q9BPW8 284 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 MYH10P35580 1976 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 THBS1P07996 1170 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 GLB1P16278 677 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 POU4F3Q15319 338 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 ENTHD1Q8IYW4 607 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 FCRL1Q96LA6 429 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 CHST8Q9H2A9 424 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 PTTG3PQ9NZH4 202 aa15.41■□□□□ 0.06
SCARB1-205ENST00000538291 SUB1P53999 127 aaKnown RBP eCLIP15.4■□□□□ 0.064e-6■■■■■ 28.5
SCARB1-205ENST00000538291 DBPQ10586 325 aaPredicted RBP15.4■□□□□ 0.06
SCARB1-205ENST00000538291 FCRL6Q6DN72 434 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 DHRS4L2Q6PKH6 230 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 KMT5CQ86Y97 462 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 RPL3LQ92901 407 aaKnown RBP15.4■□□□□ 0.06
SCARB1-205ENST00000538291 C8orf44Q96CB5 159 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 SDF2Q99470 211 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 MED18Q9BUE0 208 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 HES7Q9BYE0 225 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 ISYNA1Q9NPH2 558 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 TBX21Q9UL17 535 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 SNX11Q9Y5W9 270 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 TRGV8A0A0C4DH27 118 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 K7EQM0 130 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 FADS1O60427 444 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 PMPCAQ10713 525 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.4■□□□□ 0.06
SCARB1-205ENST00000538291 SEC22AQ96IW7 307 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 EXO1Q9UQ84 846 aaKnown RBP15.4■□□□□ 0.06
SCARB1-205ENST00000538291 A0A0B4J2A0 478 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 A0A1W2PR48 441 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 TCRBV5S1A1TA0A578 114 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 CSO75390 466 aaKnown RBP15.4■□□□□ 0.06
SCARB1-205ENST00000538291 OR8U8P0C7N1 319 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 TBXA2RP21731 343 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 AADACP22760 399 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 LGI3Q8N145 548 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 C1QTNF3Q9BXJ4 246 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 ERVMER34-1Q9H9K5 563 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 SHPKQ9UHJ6 478 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 FGF17O60258 216 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 PMP2P02689 132 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 QDPRP09417 244 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 HLA-DOBP13765 273 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 PRKACAP17612 351 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 MMP11P24347 488 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 RBP2P50120 134 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 SPRED3Q2MJR0 410 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 CATSPERDQ86XM0 798 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 WFDC8Q8IUA0 241 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 ETFBKMTQ8IXQ9 262 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 GCNT2Q8N0V5 402 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 EXD3Q8N9H8 876 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 OR10J5Q8NHC4 309 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 FAM213BQ8TBF2 198 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 KCNE4Q8WWG9 221 aa15.4■□□□□ 0.06
SCARB1-205ENST00000538291 CRYM-AS1A6NIL9 109 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 GLAP06280 429 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 RPA2P15927 270 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 UBE2KP61086 200 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 SAXO2Q658L1 398 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 MDGA2Q7Z553 956 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 PTRH1Q86Y79 214 aaKnown RBP15.39■□□□□ 0.05
SCARB1-205ENST00000538291 EGFL6Q8IUX8 553 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 LAT2Q9GZY6 243 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 GFYI3L273 518 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 LGI1O95970 557 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 ADH4P08319 380 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 C1orf87Q8N0U7 546 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 PRSS35Q8N3Z0 413 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 HSD17B6O14756 317 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 SRMP19623 302 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 GABRA4P48169 554 aa15.39■□□□□ 0.05
SCARB1-205ENST00000538291 CLN3Q13286 438 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms