RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CENPBD1B2RD01 187 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 DHHO43323 396 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 HLA-DQA2P01906 255 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 CEACAM8P31997 349 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 TIMP3P35625 211 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 OR3A2P47893 321 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 ZNF133P52736 654 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 CEACAM16Q2WEN9 425 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 ERI1Q8IV48 349 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 TIGD4Q8IY51 512 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 UBE2J2Q8N2K1 259 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 SLC26A10Q8NG04 563 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 STARD4Q96DR4 205 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 TTTY10Q9BZA0 68 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 SEC61A2Q9H9S3 476 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 EMC7Q9NPA0 242 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 NDUFA13Q9P0J0 144 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 RALYQ9UKM9 306 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 MOKQ9UQ07 419 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 KLHDC2Q9Y2U9 406 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 A0A0G2JNJ9 132 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 SMIM31A0A1B0GVY4 71 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 J3QRE1 110 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 KRT33AO76009 404 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 IL2RAP01589 272 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 MT-ND2P03891 347 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 HOXD4P09016 255 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 SBK2P0C263 348 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 CA7P43166 264 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 TLE1Q04724 770 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 FAPQ12884 760 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 DOC2BQ14184 412 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 GGTLC2Q14390 218 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 C10orf128Q5T292 105 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 LCN1P1Q5VSP4 162 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 DNM1P34Q6PK57 102 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 GLB1L2Q8IW92 636 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 C11orf40Q8WZ69 217 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 TSC22D3Q99576 134 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 MRPS26Q9BYN8 205 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 CCDC90BQ9GZT6 254 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 OPN3Q9H1Y3 402 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 MRPS18AQ9NVS2 196 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 HAO2Q9NYQ3 351 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 Q9UFV3 132 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 CLEC2DQ9UHP7 191 aa13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 EXOGQ9Y2C4 368 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-206ENST00000537582 EFCAB10A6NFE3 127 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 SNTNA6NMZ2 147 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 C1QL1O75973 258 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 CGAP01215 116 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 CDK1P06493 297 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 PIPP12273 146 aaPredicted RBP13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 LAP3P28838 519 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 ATP6V1E1P36543 226 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 CD79BP40259 229 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 GABARAPL2P60520 117 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 CSNK2BP67870 215 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 GLO1Q04760 184 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 RAB40BQ12829 278 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 SSX6Q7RTT6 188 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 OR6K3Q8NGY3 331 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 OR6N2Q8NGY6 317 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 NABP1Q96AH0 204 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 DMRTA2Q96SC8 542 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 CNN2Q99439 309 aaKnown RBP13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 YTHDF1Q9BYJ9 559 aaKnown RBP13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 LINC00470Q9BZP3 86 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 CNOT2Q9NZN8 540 aaKnown RBP13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 BLOC1S6Q9UL45 172 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 COPS3Q9UNS2 423 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 MEMO1Q9Y316 297 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 ARHGAP21Q5T5U3 1957 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 RELNP78509 3460 aa13.78□□□□□ -0.2
SFSWAP-206ENST00000537582 PRR32B1ATL7 298 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 WNT11O96014 354 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 ATP6V1B1P15313 513 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 MAP2K4P45985 399 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 HSF2Q03933 536 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 SGCAQ16586 387 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 RIPPLY2Q5TAB7 128 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 FBXW9Q5XUX1 488 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 LIX1LQ8IVB5 337 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 LINC00346Q8IVM7 164 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF610Q8N9Z0 462 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 TSPAN14Q8NG11 270 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 OR10H4Q8NGA5 316 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 INTS14Q96SY0 518 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 AMELYQ99218 206 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 MARCH7Q9H992 704 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 FGF20Q9NP95 211 aaPredicted RBP13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 B3GAT2Q9NPZ5 323 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 UPB1Q9UBR1 384 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms