RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 SYT14Q8NB59 555 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 OR6K6Q8NGW6 343 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 CHPT1Q8WUD6 406 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 RNF138Q8WVD3 245 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 TMEM234Q8WY98 164 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 TSPAN32Q96QS1 320 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 HDHD5Q9BXW7 423 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 EXO5Q9H790 373 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 QPCTLQ9NXS2 382 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 ALKBH4Q9NXW9 302 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 GRHPRQ9UBQ7 328 aa10.66□□□□□ -0.7
CLIP1-208ENST00000537004 TRGV5A0A0B4J1U4 118 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 E9PI62 339 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 J3QLW9 94 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 GABRPO00591 440 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 OR2T7P0C7T2 308 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF19P17023 458 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 SUMO3P55854 103 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-208ENST00000537004 OR12D2P58182 307 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF45Q02386 682 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 RUNX1T1Q06455 604 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 TOMM20Q15388 145 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 FAM69AQ5T7M9 428 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 TMEM53Q6P2H8 277 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF585AQ6P3V2 769 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 VASH1Q7L8A9 365 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-208ENST00000537004 SLC35F2Q8IXU6 374 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 OR2T27Q8NH04 317 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 ST8SIA1Q92185 356 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 SLC25A36Q96CQ1 311 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 DMRTA2Q96SC8 542 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 RPRD1BQ9NQG5 326 aaKnown RBP10.65□□□□□ -0.7
CLIP1-208ENST00000537004 KLRF1Q9NZS2 232 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 NOX1Q9Y5S8 564 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 PKDREJQ9NTG1 2253 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 KIAA1549Q9HCM3 1950 aa10.65□□□□□ -0.7
CLIP1-208ENST00000537004 A0A1B0GVC2 190 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 PRSS44E7EML9 344 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 E9PLN8 166 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 SELENOFO60613 162 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 GLCEO94923 617 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 SNX4O95219 450 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 PRKCAP17252 672 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 ETV6P41212 452 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 CAPZA2P47755 286 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 SLC25A1P53007 311 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 TAS2R43P59537 309 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 HNRNPA0Q13151 305 aaKnown RBP10.65□□□□□ -0.71
CLIP1-208ENST00000537004 KRR1Q13601 381 aaKnown RBP10.65□□□□□ -0.71
CLIP1-208ENST00000537004 INSL4Q14641 139 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 SGCBQ16585 318 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 MESTQ5EB52 335 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 SPANXN2Q5MJ10 180 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 GPR139Q6DWJ6 353 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 SCAIQ8N9R8 606 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 WDSUB1Q8N9V3 476 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 NTNG2Q96CW9 530 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 NEURL2Q9BR09 285 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 ALG12Q9BV10 488 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 TTTY10Q9BZA0 68 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 OR11A1Q9GZK7 315 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 TAS2R5Q9NYW4 299 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 MED11Q9P086 117 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 NCKAP5O14513 1909 aa10.65□□□□□ -0.71
CLIP1-208ENST00000537004 CACNA1DQ01668 2161 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 IQCMA0A1B0GVH7 501 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 CD8B2A6NJW9 211 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 C11orf98E9PRG8 122 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 RGS5O15539 181 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 RGS9O75916 674 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-208ENST00000537004 GAAP10253 952 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 CD8BP10966 210 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 GALP22466 123 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 PYCR1P32322 319 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 ACTA2P62736 377 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 ACTG2P63267 376 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 PMPCAQ10713 525 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 LINC01590Q5TEZ4 76 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 TIGD3Q6B0B8 471 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 ARL9Q6T311 187 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 LYPD4Q6UWN0 246 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 C5orf46Q6UWT4 87 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 TMEM91Q6ZNR0 172 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 CCDC190Q86UF4 302 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 ZNF808Q8N4W9 903 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-208ENST00000537004 OR5J2Q8NH18 312 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 STK35Q8TDR2 534 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 C17orf50Q8WW18 174 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 CEP19Q96LK0 163 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 TSSK2Q96PF2 358 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 NPAS1Q99742 590 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 PPP4R1LQ9P1A2 415 aa10.64□□□□□ -0.71
CLIP1-208ENST00000537004 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.63□□□□□ -0.71
CLIP1-208ENST00000537004 SMIM30A4D0T7 59 aa10.63□□□□□ -0.71
CLIP1-208ENST00000537004 FAM171A2A8MVW0 826 aa10.63□□□□□ -0.71
CLIP1-208ENST00000537004 H7C1C5 153 aa10.63□□□□□ -0.71
CLIP1-208ENST00000537004 AQP7O14520 342 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms