RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SHISA8B8ZZ34 492 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 UBL3O95164 117 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PAHP00439 452 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 APEHP13798 732 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 MMP15P51511 669 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 AP2S1P53680 142 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PRPS1P60891 318 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 MRPL28Q13084 256 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 TP53I3Q53FA7 332 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ARSKQ6UWY0 536 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 BAIAP2L2Q6UXY1 529 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SMAP2Q8WU79 429 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 AKAP1Q92667 903 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 FER1L6-AS2Q96M78 137 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SIGLEC12Q96PQ1 595 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 HES7Q9BYE0 225 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 B3GNT2Q9NY97 397 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PLA2G3Q9NZ20 509 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PPP4R1LQ9P1A2 415 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 TEKT2Q9UIF3 430 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 FBXL2Q9UKC9 423 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 VDAC3Q9Y277 283 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 MSRB2Q9Y3D2 182 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PIEZO2Q9H5I5 2752 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 A0A1W2PRG6 482 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 TP53I11O14683 189 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 CTDSPLO15194 276 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SHOXO15266 292 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 EPXP11678 715 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 BTCP35070 178 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 GPR85P60893 370 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PITPNAQ00169 270 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 OC90Q02509 493 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 DEFB109BQ30KR1 87 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SLC36A2Q495M3 483 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ESCO2Q56NI9 601 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 JMJD6Q6NYC1 403 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 C9orf62Q8N4C0 152 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 RFLNBQ8N5W9 214 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 LRRC17Q8N6Y2 441 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ZNF563Q8TA94 476 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PAQR8Q8TEZ7 354 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 C7orf50Q9BRJ6 194 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ZNF275Q9NSD4 429 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SPATA2Q9UM82 520 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 CACNG2Q9Y698 323 aa11.63□□□□□ -0.55
CDK5RAP3-202ENST00000536708 IGKV1D-42A0A075B6H8 117 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 LEUTXA8MZ59 168 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 IMPA2O14732 288 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 GSTZ1O43708 216 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 PNMTP11086 282 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SPI1P17947 270 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ATF1P18846 271 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 UQCRC1P31930 480 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 P2RX1P51575 399 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SLC25A1P53007 311 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 HCCSP53701 268 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 FOXK1P85037 733 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ABHD17BQ5VST6 288 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SPINK14Q6IE38 97 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 WDSUB1Q8N9V3 476 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ZNF248Q8NDW4 579 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SNX33Q8WV41 574 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ABCG5Q9H222 651 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 DEPPQ9NTK1 212 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 CAMK2AQ9UQM7 478 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SLC6A5Q9Y345 797 aa11.62□□□□□ -0.55
CDK5RAP3-202ENST00000536708 OR6C68A6NDL8 312 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ZNF891A8MT65 544 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 LRRN3E7EW58 273 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 EIF4E2O60573 245 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 NEURL1O76050 574 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 GLCEO94923 617 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 WDPCPO95876 746 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 M6PRP20645 277 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 TACR3P29371 465 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 CD96P40200 585 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 CYB561P49447 251 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 C17orf67Q0P5P2 114 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 CBFBQ13951 182 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ZNF684Q5T5D7 378 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 LINC01590Q5TEZ4 76 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 WBP2NLQ6ICG8 309 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ATG4DQ86TL0 474 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 LRRC75AQ8NAA5 344 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 GPR119Q8TDV5 335 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 ZNRF4Q8WWF5 429 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 YIPF5Q969M3 257 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SCMH1Q96GD3 660 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 MAP6Q96JE9 813 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 HYLS1Q96M11 299 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 JSRP1Q96MG2 331 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 KLHL1Q9NR64 748 aa11.61□□□□□ -0.55
CDK5RAP3-202ENST00000536708 SLC23A1Q9UHI7 598 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms