RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SPTY2D1-AS1A0A0U1RR47 76 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 CCSO14618 274 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 TCAPO15273 167 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 ZIC2O95409 532 aaPredicted RBP12.7□□□□□ -0.38
LIG1-203ENST00000536218 AVPR2P30518 371 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 TSFMP43897 325 aaKnown RBP12.7□□□□□ -0.38
LIG1-203ENST00000536218 PCP4P48539 62 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 SPCS3P61009 180 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 CDNFQ49AH0 187 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 ARMC6Q6NXE6 501 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 ABHD13Q7L211 337 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 KCNRGQ8N5I3 272 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 OR4A4PQ8NGN8 299 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 OR8S1Q8NH09 359 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 TM4SF19Q96DZ7 209 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 GFOD1Q9NXC2 390 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
LIG1-203ENST00000536218 PILRAQ9UKJ1 303 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 FGF17O60258 216 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 NR2C1P13056 603 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 ST6GAL1P15907 406 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 ITGA3P26006 1051 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 IL10RAQ13651 578 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
LIG1-203ENST00000536218 PYY3Q5JQD4 70 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 SLC36A1Q7Z2H8 476 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 NKAIN4Q8IVV8 208 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 CSNK1A1LQ8N752 337 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 TSTD1Q8NFU3 115 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 NT5CQ8TCD5 201 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 MARS2Q96GW9 593 aaKnown RBP12.7□□□□□ -0.38
LIG1-203ENST00000536218 OR14A2Q96R54 314 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 SUCNR1Q9BXA5 334 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 TSPAN10Q9H1Z9 355 aaPredicted RBP12.7□□□□□ -0.38
LIG1-203ENST00000536218 BCL2L10Q9HD36 194 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 SEC16AO15027 2179 aa12.7□□□□□ -0.38
LIG1-203ENST00000536218 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 HYAL3O43820 417 aaPredicted RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 FOLR2P14207 255 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 NUBP1P53384 320 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 DUSP5Q16690 384 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 ALKBH2Q6NS38 261 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 NDUFAF7Q7L592 441 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 POMGNT2Q8NAT1 580 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 BAHD1Q8TBE0 780 aaPredicted RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 PMM1Q92871 262 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 S100A16Q96FQ6 103 aaKnown RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 ZNF337Q9Y3M9 751 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 AP4M1O00189 453 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 TNFSF14O43557 240 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 RDH16O75452 317 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 DAOP14920 347 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 HPGDP15428 266 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 HTR5AP47898 357 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 RGS8P57771 180 aaPredicted RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 BDH1Q02338 343 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 MFSD12Q6NUT3 480 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 C15orf54Q8N8G6 183 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 OR9A4Q8NGU2 314 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 SAMD8Q96LT4 415 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 OPA3Q9H6K4 179 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 WSB2Q9NYS7 404 aaPredicted RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 PPP4R1LQ9P1A2 415 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 PISDQ9UG56 409 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 WDR45Q9Y484 360 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 CABIN1Q9Y6J0 2220 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 CENPVL1A0A0U1RR11 272 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 PLPP2O43688 288 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 SNRNP70P08621 437 aaKnown RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 CPMP14384 443 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 S100A2P29034 98 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 TRHRP34981 398 aaPredicted RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 IFNGR2P38484 337 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 RPS15P62841 145 aaKnown RBP12.69□□□□□ -0.38
LIG1-203ENST00000536218 GAS6Q14393 721 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 HYAL4Q2M3T9 481 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 TEX30Q5JUR7 227 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 RPL13AP3Q6NVV1 102 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 KRT77Q7Z794 578 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 AVL9Q8NBF6 648 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 STEAP2Q8NFT2 490 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 OR51S1Q8NGJ8 323 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 MOAP1Q96BY2 351 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 TIMP4Q99727 224 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 RNF122Q9H9V4 155 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 PLEKHA1Q9HB21 404 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 FBXO34Q9NWN3 711 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 ACAD8Q9UKU7 415 aa12.69□□□□□ -0.38
LIG1-203ENST00000536218 A0A0J9YY10 115 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms