RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 HSF2Q03933 536 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 CARD17Q5XLA6 110 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 KRT80Q6KB66 452 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 PLBD1Q6P4A8 553 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 SYT9Q86SS6 491 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 C17orf78Q8N4C9 275 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 CCDC120Q96HB5 630 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 TEAD3Q99594 435 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 RBM24Q9BX46 236 aaKnown RBP14.31□□□□□ -0.12
VAMP1-205ENST00000535927 SIAEQ9HAT2 523 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 SRA1Q9HD15 236 aaKnown RBP14.31□□□□□ -0.12
VAMP1-205ENST00000535927 OBP2BQ9NPH6 170 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 PLCXD1Q9NUJ7 323 aa14.31□□□□□ -0.12
VAMP1-205ENST00000535927 USP9XQ93008 2570 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-205ENST00000535927 IGLV1-36A0A0B4J1U3 117 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 SMNDC1O75940 238 aaKnown RBP eCLIP14.3□□□□□ -0.12
VAMP1-205ENST00000535927 SLC2A10O95528 541 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 PSMB1P20618 241 aaKnown RBP14.3□□□□□ -0.12
VAMP1-205ENST00000535927 BMP5P22003 454 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 SLC2A5P22732 501 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 ASCL1P50553 236 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 ADORA2A-AS1P86434 159 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 FAPQ12884 760 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 CDK5R2Q13319 367 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 KLHL22Q53GT1 634 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 TEX30Q5JUR7 227 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 FAM27BQ5VT28 67 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 ANKRD16Q6P6B7 361 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 ZNF610Q8N9Z0 462 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 CYB561A3Q8NBI2 242 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 PROKR2Q8NFJ6 384 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 CA5BP1Q8WTZ4 195 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 ZNF582Q96NG8 517 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-205ENST00000535927 FOXB1Q99853 325 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 KCNN2Q9H2S1 579 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 NELFAQ9H3P2 528 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 MARCH7Q9H992 704 aa14.3□□□□□ -0.12
VAMP1-205ENST00000535927 MRPS18AQ9NVS2 196 aaKnown RBP14.3□□□□□ -0.12
VAMP1-205ENST00000535927 GNAO1P09471 354 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 CCDC159P0C7I6 412 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 OR8G3PP0DMU2 310 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 PPP3CBP16298 524 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 CTLA4P16410 223 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 CDH11P55287 796 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 PCBD1P61457 104 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 GGTLC2Q14390 218 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 CEACAM16Q2WEN9 425 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 SFRP5Q5T4F7 317 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 RHOUQ7L0Q8 258 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 SHFQ7M4L6 423 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 STEAP2Q8NFT2 490 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 OR51V1Q9H2C8 321 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 KCNJ16Q9NPI9 418 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 RASSF1Q9NS23 344 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 TMEM38BQ9NVV0 291 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 SCN3BQ9NY72 215 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 PRSS50Q9UI38 385 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 FBXL3Q9UKT7 428 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 BLOC1S6Q9UL45 172 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 NOTCH2Q04721 2471 aa14.29□□□□□ -0.12
VAMP1-205ENST00000535927 ZNF823P16415 610 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 MSR1P21757 451 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 GSTT1P30711 240 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 CD79BP40259 229 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 UQCRFS1P47985 274 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 MTNR1AP48039 350 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 SPTBN1Q01082 2364 aaKnown RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 RAB40BQ12829 278 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 APOFQ13790 326 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 KLHL12Q53G59 568 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 PHYHD1Q5SRE7 291 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 C6orf141Q5SZD1 244 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 LINC01590Q5TEZ4 76 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 ZNF474Q6S9Z5 364 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 LSRQ86X29 649 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 ZNF433Q8N7K0 673 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 ZNF454Q8N9F8 522 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 NANOS1Q8WY41 292 aaKnown RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 OTULINQ96BN8 352 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 YIPF3Q9GZM5 350 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 CNOT2Q9NZN8 540 aaKnown RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 LRCH1Q9Y2L9 728 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 COA3Q9Y2R0 106 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-205ENST00000535927 UGT2A1Q9Y4X1 527 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 TMEM14AQ9Y6G1 99 aa14.28□□□□□ -0.12
VAMP1-205ENST00000535927 USP9YO00507 2555 aaPredicted RBP14.27□□□□□ -0.13
VAMP1-205ENST00000535927 CIB4A0PJX0 185 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 FAM183AA6NL82 134 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 C12orf71A8MTZ7 269 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 H7C1C5 153 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 ENTPD6O75354 484 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 WBP4O75554 376 aaKnown RBP14.27□□□□□ -0.13
VAMP1-205ENST00000535927 CLIC3O95833 236 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 CST2P09228 141 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 PIPP12273 146 aaPredicted RBP14.27□□□□□ -0.13
VAMP1-205ENST00000535927 IGHV1-2P23083 117 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.13
VAMP1-205ENST00000535927 LCN6P62502 163 aa14.27□□□□□ -0.13
VAMP1-205ENST00000535927 PCK2Q16822 640 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms