RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PLEKHA1Q9HB21 404 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 KLRF1Q9NZS2 232 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 RALGAPA1Q6GYQ0 2036 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ANXA3P12429 323 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF28P17035 718 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ADRA2CP18825 462 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 APOBEC1P41238 236 aaKnown RBP12.01□□□□□ -0.49
VPS33B-202ENST00000535906 PUDPQ08623 228 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 FOXF1Q12946 379 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 OR7A5Q15622 319 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 MEP1BQ16820 701 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 MTFR2Q6P444 385 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 LYPD8Q6UX82 237 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 LINGO2Q7L985 606 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 CDH24Q86UP0 819 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 OR10G3Q8NGC4 313 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 OR56B4Q8NH76 319 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 TTC9Q92623 222 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 SLC26A1Q9H2B4 701 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 LIN7BQ9HAP6 207 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ZFP64Q9NPA5 681 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF222Q9UK12 451 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ERVH48-1M5A8F1 160 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 EFNA2O43921 213 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ZFAND5O76080 213 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 NAGAP17050 411 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 PTGDSP41222 190 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 KIR3DL2P43630 455 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 SUMO3P55854 103 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-202ENST00000535906 INPP5JQ15735 1006 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-202ENST00000535906 FCRLAQ7L513 359 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF676Q8N7Q3 588 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 GIMAP1Q8WWP7 306 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 OR8B4Q96RC9 309 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 ELOVL3Q9HB03 270 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 TCF7L1Q9HCS4 588 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 PTTG3PQ9NZH4 202 aa12.01□□□□□ -0.49
VPS33B-202ENST00000535906 H3BML4 177 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 GABARAPH6UMI1 98 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 PHYHO14832 338 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 LAMTOR5O43504 91 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 MPZL1O95297 269 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 ECDO95905 644 aaPredicted RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 SPARCP09486 303 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 CALCBP10092 127 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 FGF5P12034 268 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 CXCL3P19876 107 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 MAPK3P27361 379 aaPredicted RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 ADAM8P78325 824 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 ST3GAL2Q16842 350 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 WDR38Q5JTN6 314 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 C1QTNF12Q5T7M4 302 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF782Q6ZMW2 699 aaPredicted RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 DEFB123Q8N688 67 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF248Q8NDW4 579 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 DNAAF1Q8NEP3 725 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 MFSD8Q8NHS3 518 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 SLITRK2Q9H156 845 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 COA3Q9Y2R0 106 aaPredicted RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 ZDBF2Q9HCK1 2354 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 TMEM212A6NML5 194 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 SULT1B1O43704 296 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF254O75437 659 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 WNT11O96014 354 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 RAB40ALP0C0E4 278 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 IFNGR1P15260 489 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 CCKBRP32239 447 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 DLX5P56178 289 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 SLC17A1Q14916 467 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 H1FNTQ75WM6 255 aaPredicted RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 FGD2Q7Z6J4 655 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 OR6S1Q8NH40 331 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF431Q8TF32 576 aaPredicted RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 RAB40AQ8WXH6 277 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 TMEM106AQ96A25 262 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 S100A16Q96FQ6 103 aaKnown RBP12□□□□□ -0.49
VPS33B-202ENST00000535906 C4orf45Q96LM5 186 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 PPP4R1LQ9P1A2 415 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 KLHL9Q9P2J3 617 aa12□□□□□ -0.49
VPS33B-202ENST00000535906 D6RAR5 112 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 YKT6O15498 198 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 PNPP00491 289 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 CCR9P51686 369 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 FMODQ06828 376 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 RASGEF1BQ0VAM2 473 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 ZP4Q12836 540 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 PEAR1Q5VY43 1037 aaPredicted RBP11.99□□□□□ -0.49
VPS33B-202ENST00000535906 SLC18B1Q6NT16 456 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 MDGA2Q7Z553 956 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 LUZP2Q86TE4 346 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 LRRTM1Q86UE6 522 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 SERPINA12Q8IW75 414 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF679Q8IYX0 411 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 OR52I2Q8NH67 350 aa11.99□□□□□ -0.49
VPS33B-202ENST00000535906 PPP1R14AQ96A00 147 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms