RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ACOT1Q86TX2 421 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 CLEC4FQ8N1N0 589 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 OR2L13Q8N349 312 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 TMCO5AQ8N6Q1 288 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 MINDY2Q8NBR6 621 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 FAM71CQ8NEG0 241 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 DENND6BQ8NEG7 585 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 GDAP1Q8TB36 358 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 ACTL9Q8TC94 416 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 GPR119Q8TDV5 335 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 PTX4Q96A99 478 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 FAM3DQ96BQ1 224 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 EFHD2Q96C19 240 aaPredicted RBP-0.14□□□□□ -2.43
COPB1-212ENST00000534771 MED8Q96G25 268 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 SPATA13Q96N96 652 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 OXGR1Q96P68 337 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 TGM7Q96PF1 710 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 GSDMCQ9BYG8 508 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 DSN1Q9H410 356 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 ECT2Q9H8V3 914 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 ACTR8Q9H981 624 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 GRPEL1Q9HAV7 217 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 PRMT8Q9NR22 394 aaPredicted RBP-0.14□□□□□ -2.43
COPB1-212ENST00000534771 SHPKQ9UHJ6 478 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 COL6A6A6NMZ7 2263 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 GBF1Q92538 1859 aa-0.14□□□□□ -2.43
COPB1-212ENST00000534771 SYNE1Q8NF91 8797 aaKnown RBP-0.14□□□□□ -2.43
COPB1-212ENST00000534771 MUC12Q9UKN1 5478 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 IGHV3-49A0A0A0MS15 119 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 TCRBV9S1A1TA0A576 114 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 FAM47DPA6NHR8 397 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 F5H6K3 240 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 SDHDO14521 159 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 EIF1BO60739 113 aaKnown RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 TOM1L1O75674 476 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 IGHG4P01861 327 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CAPN1P07384 714 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 MMP7P09237 267 aaPredicted RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 SLC35G6P0C7Q6 338 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CCNB1P14635 433 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 RAB3BP20337 219 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 GZMHP20718 246 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 SLC2A5P22732 501 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 PSMA2P25787 234 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 LOXP28300 417 aaPredicted RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 GCAP28676 217 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 HPCAL1P37235 193 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 EIF1P41567 113 aaKnown RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 UQCRFS1P47985 274 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 RFX3P48380 749 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 KLRC3Q07444 240 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CDH17Q12864 832 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 MORF4L2Q15014 288 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 TRIP10Q15642 601 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CHRNA6Q15825 494 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 ZSCAN26Q16670 478 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CCDC40Q4G0X9 1142 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 KLHL12Q53G59 568 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 THEM4Q5T1C6 240 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 FAM71F2Q6NXP2 309 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 NIPAL3Q6P499 406 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 FBXW12Q6X9E4 464 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 WDR88Q6ZMY6 472 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 PIANPQ8IYJ0 282 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 STK40Q8N2I9 435 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 RNF148Q8N7C7 305 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 ZNF563Q8TA94 476 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 UFD1Q92890 307 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 ZNF625Q96I27 306 aaPredicted RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 C12orf42Q96LP6 360 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 ZMAT2Q96NC0 199 aaKnown RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 GPR82Q96P67 336 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 VPS35Q96QK1 796 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 OR2V2Q96R30 315 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 RBBP8Q99708 897 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 HSD17B10Q99714 261 aaKnown RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 TXNDC17Q9BRA2 123 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CHCHD7Q9BUK0 85 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 RPF2Q9H7B2 306 aaKnown RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 LINC00574Q9H8X3 128 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CSNK1G1Q9HCP0 422 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 ZNF302Q9NR11 478 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 SLC17A5Q9NRA2 495 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 FBXO8Q9NRD0 319 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CYP39A1Q9NYL5 469 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 MTCH1Q9NZJ7 389 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 FETUBQ9UGM5 382 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 TMCO1Q9UM00 188 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 RASD1Q9Y272 281 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 GSTK1Q9Y2Q3 226 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 STRAPQ9Y3F4 350 aaKnown RBP-0.15□□□□□ -2.43
COPB1-212ENST00000534771 OR10H1Q9Y4A9 318 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 CR1P17927 2039 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 THADAQ6YHU6 1953 aa-0.15□□□□□ -2.43
COPB1-212ENST00000534771 ADAMTS7Q9UKP4 1686 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 IGLV3-22A0A075B6J6 115 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 TRAV19A0A0A6YYK7 116 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 A0A1W2PNM2 257 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 FAM230AA0A1W2PPH8 454 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms