RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RWDD4	Q6NW29	188 aa	Known RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4L9	Q6RFH8	374 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TMEM110	Q86TL2	294 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NELFCD	Q8IXH7	590 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LINC00518	Q8N0U6	118 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TMEM251	Q8N6I4	163 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF614	Q8N883	585 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	AQP11	Q8NBQ7	271 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNRF1	Q8ND25	227 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR52B6	Q8NGF0	335 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RDH11	Q8TC12	318 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MCOLN3	Q8TDD5	553 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CHPT1	Q8WUD6	406 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SELENOM	Q8WWX9	145 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LCN9	Q8WX39	176 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NCLN	Q969V3	563 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C8orf76	Q96K31	380 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MCCC1	Q96RQ3	725 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NDUFAF3	Q9BU61	184 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PARL	Q9H300	379 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CENPH	Q9H3R5	247 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SRMS	Q9H3Y6	488 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	COQ10B	Q9H8M1	238 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ACTR8	Q9H981	624 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CUTC	Q9NTM9	273 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC35D1	Q9NTN3	355 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4	Q9UBX2	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A087WZY1	265 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A0G2JMM0	328 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A0U1RQV5	110 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A1W2PPB8	328 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A1W2PRS3	328 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KIR3DP1	A8MWS1	328 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NDC80	O14777	642 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SCGB2A1	O75556	95 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC25A14	O95258	325 aa	Predicted RBP	3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IFNW1	P05000	195 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CRYBA1	P05813	215 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GP9	P14770	177 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CD1D	P15813	335 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MAGEA4	P43358	317 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HLCS	P50747	726 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZP4	Q12836	540 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CALCOCO2	Q13137	446 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CUL2	Q13617	745 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZIC1	Q15915	447 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HKDC1	Q2TB90	917 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MOGAT2	Q3SYC2	334 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PARP15	Q460N3	678 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PRMT9	Q6P2P2	845 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SPESP1	Q6UW49	350 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TMEM205	Q6UW68	189 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GDPGP1	Q6ZNW5	385 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ASRGL1	Q7L266	308 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CARM1	Q86X55	608 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF547	Q8IVP9	402 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SDR9C7	Q8NEX9	313 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LINC01006	Q8NI28	216 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NANP	Q8TBE9	248 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MCHR2	Q969V1	340 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NABP1	Q96AH0	204 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NPY6R	Q99463	290 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC30A2	Q9BRI3	323 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RAB11FIP5	Q9BXF6	653 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	WDR41	Q9HAD4	459 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	EDA2R	Q9HAV5	297 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C14orf105	Q9NVL8	296 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NDE1	Q9NXR1	346 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR12D3	Q9UGF7	316 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ASIC3	Q9UHC3	531 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	STAP1	Q9ULZ2	295 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PSMD13	Q9UNM6	376 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MGAT4B	Q9UQ53	548 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	EXOG	Q9Y2C4	368 aa	Known RBP	3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442		U3KQV3	271 aa		3.54	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAM230A	A0A1W2PPH8	454 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RNF222	A6NCQ9	220 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TMCO5B	A8MYB1	307 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442		H7C417	338 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442		K7EQG2	157 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	BTN3A3	O00478	584 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FBP2	O00757	339 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PDXK	O00764	312 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PEX11A	O75192	247 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ERLIN1	O75477	346 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CDK14	O94921	469 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GLS	O94925	669 aa	Predicted RBP	3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MSMB	P08118	114 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TACSTD2	P09758	323 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CALR	P27797	417 aa	Known RBP	3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	STC1	P52823	247 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TMEM50B	P56557	158 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TRA2B	P62995	288 aa	Known RBP	3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CCDC14	Q49A88	953 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HSP90AA5P	Q58FG0	334 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HENMT1	Q5T8I9	393 aa	Known RBP	3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	WDR25	Q64LD2	544 aa	Predicted RBP	3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	UGT2A3	Q6UWM9	527 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DPY19L2P2	Q6ZN68	376 aa		3.53	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF329	Q86UD4	541 aa		3.53	□□□□□ -1.84

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