RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TOP3AQ13472 1001 aaPredicted RBP12.07□□□□□ -0.48
SF3B2-215ENST00000534307 DGCR6Q14129 220 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 ANKDD1AQ495B1 522 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 TMEM53Q6P2H8 277 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF730Q6ZMV8 503 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 FOXL2NBQ6ZUU3 175 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 TMPRSS11FQ6ZWK6 438 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 FKBP9P1Q75LS8 142 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 OAFQ86UD1 273 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF786Q8N393 782 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 FAM86B1Q8N7N1 296 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 OR51A7Q8NH64 312 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 FAM162AQ96A26 154 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 SYT3Q9BQG1 590 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 ALG12Q9BV10 488 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 BPESC1Q9GZL8 116 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 C1orf198Q9H425 327 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 DYNLRB1Q9NP97 96 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 DCAF13Q9NV06 445 aaKnown RBP12.07□□□□□ -0.48
SF3B2-215ENST00000534307 FAM53CQ9NYF3 392 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 NDUFAF4Q9P032 175 aa12.07□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF346Q9UL40 294 aaKnown RBP12.07□□□□□ -0.48
SF3B2-215ENST00000534307 GMNCA6NCL1 334 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 ERCC1P07992 297 aaPredicted RBP12.06□□□□□ -0.48
SF3B2-215ENST00000534307 NR2C1P13056 603 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 CCL2P13500 99 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF250P15622 560 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF16P17020 682 aaPredicted RBP12.06□□□□□ -0.48
SF3B2-215ENST00000534307 GPR4P46093 362 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 LIMS1P48059 325 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 CD47Q08722 323 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 RIN1Q13671 783 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 GGTLC2Q14390 218 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 IQCCQ4KMZ1 466 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 GKAP1Q5VSY0 366 aaPredicted RBP12.06□□□□□ -0.48
SF3B2-215ENST00000534307 FAM27BQ5VT28 67 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 CYB5R2Q6BCY4 276 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 PODNL1Q6PEZ8 512 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 LRRC18Q8N456 261 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 ARIH2OSQ8N7S6 290 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
SF3B2-215ENST00000534307 TMEM158Q8WZ71 300 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 DHRS1Q96LJ7 313 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 NSRP1Q9H0G5 558 aaKnown RBP12.06□□□□□ -0.48
SF3B2-215ENST00000534307 TPK1Q9H3S4 243 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 GORASP2Q9H8Y8 452 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 RNF121Q9H920 327 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 REV1Q9UBZ9 1251 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 EGFL7Q9UHF1 273 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 RPS6KA6Q9UK32 745 aa12.06□□□□□ -0.48
SF3B2-215ENST00000534307 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 SLC22A23A1A5C7 686 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 A6NIZ1 184 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 M0R233 179 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 PTHP01270 115 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 SEMG1P04279 462 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 TACSTD2P09758 323 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 FAM157BP0CG42 384 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF23P17027 643 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF32P17041 273 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 GZMKP49863 264 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 RAP1BP61224 184 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 RAP1AP62834 184 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 MAD2L1BPQ15013 274 aaPredicted RBP12.05□□□□□ -0.48
SF3B2-215ENST00000534307 CARTPTQ16568 116 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 PABPC1L2AQ5JQF8 200 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 FAM122BQ7Z309 247 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 ZNF540Q8NDQ6 660 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 UBASH3BQ8TF42 649 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 NSMAFQ92636 917 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 MSI2Q96DH6 328 aaKnown RBP12.05□□□□□ -0.48
SF3B2-215ENST00000534307 FUZQ9BT04 418 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 MS4A5Q9H3V2 200 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 CDH20Q9HBT6 801 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 ADA2Q9NZK5 511 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 ADAM18Q9Y3Q7 739 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 MEGF8Q7Z7M0 2845 aa12.05□□□□□ -0.48
SF3B2-215ENST00000534307 LILRA1O75019 489 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 HPXP02790 462 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 H1F0P07305 194 aaKnown RBP12.04□□□□□ -0.48
SF3B2-215ENST00000534307 CD14P08571 375 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 HSD17B1P14061 328 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 RHCEP18577 417 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 APEX1P27695 318 aaKnown RBP12.04□□□□□ -0.48
SF3B2-215ENST00000534307 OMPP47874 163 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 UCP2P55851 309 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 ERVS71-1P61550 626 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 PSG4Q00888 419 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 PLP2Q04941 152 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 SEC23BQ15437 767 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 TBC1D28Q2M2D7 210 aa12.04□□□□□ -0.48
SF3B2-215ENST00000534307 ZBED5Q49AG3 693 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms