RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 PROKR2Q8NFJ6 384 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 TRUB1Q8WWH5 349 aaKnown RBP12.36□□□□□ -0.43
CMTM1-217ENST00000533666 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 WACQ9BTA9 647 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 FN3KQ9H479 309 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 SRA1Q9HD15 236 aaKnown RBP12.36□□□□□ -0.43
CMTM1-217ENST00000533666 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 H2AFY2Q9P0M6 372 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-217ENST00000533666 NKX1-2Q9UD57 310 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-217ENST00000533666 FBXL3Q9UKT7 428 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 UTP20O75691 2785 aaKnown RBP12.36□□□□□ -0.43
CMTM1-217ENST00000533666 CENPEQ02224 2701 aa12.36□□□□□ -0.43
CMTM1-217ENST00000533666 A0A096LPE4 126 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 UBL3O95164 117 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 CLDN1O95832 211 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 HLA-DQA2P01906 255 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 EPXP11678 715 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 CTLA4P16410 223 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 IGFBP2P18065 325 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 MSR1P21757 451 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-217ENST00000533666 PCBD1P61457 104 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 SGCAQ16586 387 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 SLC36A2Q495M3 483 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 TTC23Q5W5X9 447 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 C12orf73Q69YU5 71 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-217ENST00000533666 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 ZBTB46Q86UZ6 589 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 CYB561A3Q8NBI2 242 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 OR8J1Q8NGP2 316 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-217ENST00000533666 HRASLS5Q96KN8 279 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 APOL4Q9BPW4 351 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 GRIP2Q9C0E4 1043 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-217ENST00000533666 KCNN3Q9UGI6 736 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 GMPPBQ9Y5P6 360 aa12.35□□□□□ -0.43
CMTM1-217ENST00000533666 SNTNA6NMZ2 147 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 C12orf71A8MTZ7 269 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 H0YJX3 145 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 PRODHO43272 600 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 MPZL2O60487 215 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 GOSR1O95249 250 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 SNAP29O95721 258 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 FMO3P31513 532 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 CCKARP32238 428 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 GGT2P36268 569 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 ARR3P36575 388 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 PTDSS1P48651 473 aaKnown RBP12.34□□□□□ -0.43
CMTM1-217ENST00000533666 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 ZNF362Q5T0B9 420 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-217ENST00000533666 FAM27BQ5VT28 67 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 TMEM53Q6P2H8 277 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
CMTM1-217ENST00000533666 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 OR10H5Q8NGA6 315 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 OR52N5Q8NH56 324 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 LINC01560Q8TB33 94 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 TMEM163Q8TC26 289 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 CCNB1IP1Q9NPC3 277 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 COA3Q9Y2R0 106 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-217ENST00000533666 POLR1DQ9Y2S0 133 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 UGT2A1Q9Y4X1 527 aa12.34□□□□□ -0.43
CMTM1-217ENST00000533666 IGLV1-36A0A0B4J1U3 117 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 LOC100130705A0A1B0GUX0 176 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 SLC16A6O15403 523 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 TLX2O43763 284 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-217ENST00000533666 TMCC2O75069 709 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 SEC14L2O76054 403 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 RAB36O95755 333 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 PTHP01270 115 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 HRGP04196 525 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 CST2P09228 141 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 CD79AP11912 226 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 ZNF823P16415 610 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 SPI1P17947 270 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 EPHA2P29317 976 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 CDAP32320 146 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 POLR2IP36954 125 aaKnown RBP12.33□□□□□ -0.44
CMTM1-217ENST00000533666 RPS7P62081 194 aaKnown RBP12.33□□□□□ -0.44
CMTM1-217ENST00000533666 LSM6P62312 80 aaKnown RBP12.33□□□□□ -0.44
CMTM1-217ENST00000533666 HSF2Q03933 536 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 KEAP1Q14145 624 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 TAB1Q15750 504 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 GSG1Q2KHT4 349 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
CMTM1-217ENST00000533666 LCN1P1Q5VSP4 162 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms