RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 RFX4Q33E94 735 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 DNAL1Q4LDG9 190 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 ZNF770Q6IQ21 691 aaPredicted RBP8.51□□□□□ -1.05
NUP98-220ENST00000533346 C1orf174Q8IYL3 243 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 OR10H5Q8NGA6 315 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 OR4C15Q8NGM1 316 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 OR13C2Q8NGS9 318 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 FAM46AQ96IP4 442 aaKnown RBP8.51□□□□□ -1.05
NUP98-220ENST00000533346 Q96MF0 132 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 DOK1Q99704 481 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 GPA33Q99795 319 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 CACNG6Q9BXT2 260 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 SEC61A2Q9H9S3 476 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 VSX1Q9NZR4 365 aaPredicted RBP8.51□□□□□ -1.05
NUP98-220ENST00000533346 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 AURKCQ9UQB9 309 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 SPEF1Q9Y4P9 236 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 LYVE1Q9Y5Y7 322 aa8.51□□□□□ -1.05
NUP98-220ENST00000533346 TMEM129A0AVI4 362 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 PRSS37A4D1T9 235 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 UNC119BA6NIH7 251 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 IDH3BO43837 385 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 SEC14L2O76054 403 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 F12P00748 615 aaPredicted RBP8.5□□□□□ -1.05
NUP98-220ENST00000533346 CST2P09228 141 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 INHBBP09529 407 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 RAP2AP10114 183 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 COX5BP10606 129 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 CD79AP11912 226 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 HOXB4P17483 251 aaPredicted RBP8.5□□□□□ -1.05
NUP98-220ENST00000533346 RRM2P31350 389 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 THBS4P35443 961 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 GIPRP48546 466 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 RPS6KA3P51812 740 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 BNIP1Q12981 228 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 KCNMB1Q16558 191 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 MESTQ5EB52 335 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 FGD3Q5JSP0 725 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 RPL13AP3Q6NVV1 102 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 TMEM53Q6P2H8 277 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 SMARCD3Q6STE5 483 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 THSD4Q6ZMP0 1018 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 SLC16A14Q7RTX9 510 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 ADCK1Q86TW2 530 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 CLDN22Q8N7P3 220 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 SYT14Q8NB59 555 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 OR1J2Q8NGS2 313 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 GNPDA2Q8TDQ7 276 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 RSRC1Q96IZ7 334 aaKnown RBP8.5□□□□□ -1.05
NUP98-220ENST00000533346 Q96M85 177 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 BTBD10Q9BSF8 475 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 KCNN2Q9H2S1 579 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 MYOZ1Q9NP98 299 aaPredicted RBP8.5□□□□□ -1.05
NUP98-220ENST00000533346 IL20Q9NYY1 176 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 SLC7A8Q9UHI5 535 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 TMCC3Q9ULS5 477 aa8.5□□□□□ -1.05
NUP98-220ENST00000533346 CR1P17927 2039 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 TEX13CA0A0J9YWL9 993 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 ARRDC5A6NEK1 342 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 UBOX5O94941 541 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 SLC2A10O95528 541 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 CSF3P09919 207 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 OR4A8P0C604 315 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 RPL4P36578 427 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 CAPZA2P47755 286 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 EFNA4P52798 201 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 PCBD1P61457 104 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 RPS23P62266 143 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 LSM6P62312 80 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 SNRPD2P62316 118 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 ERVK-25P63136 954 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 MYBPC1Q00872 1141 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 SPIBQ01892 262 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 PIGFQ07326 219 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 CD47Q08722 323 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 NPRL3Q12980 569 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 DAG1Q14118 895 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 RAB39AQ14964 217 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 RAB35Q15286 201 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 CLEC12BQ2HXU8 276 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 FAM98BQ52LJ0 330 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 PGBD2Q6P3X8 592 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 CD300LDQ6UXZ3 194 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 CYP2R1Q6VVX0 501 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 IGFN1Q86VF2 1251 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 PAPD5Q8NDF8 572 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 OR52J3Q8NH60 311 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 MRPL24Q96A35 216 aaKnown RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 MS4A3Q96HJ5 214 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 ZNF570Q96NI8 536 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 DDOQ99489 341 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 SH3GL3Q99963 347 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 THTPAQ9BU02 230 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 OR52D1Q9H346 318 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 MMADHCQ9H3L0 296 aaPredicted RBP8.49□□□□□ -1.05
NUP98-220ENST00000533346 POLE4Q9NR33 117 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 ADAM18Q9Y3Q7 739 aa8.49□□□□□ -1.05
NUP98-220ENST00000533346 IGLV3-9A0A075B6K5 115 aa8.48□□□□□ -1.05
NUP98-220ENST00000533346 IQCMA0A1B0GVH7 501 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms