RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TMEM53Q6P2H8 277 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 DPPA2Q7Z7J5 298 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 BIVMQ86UB2 503 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 CLDN22Q8N7P3 220 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 FNDC8Q8TC99 324 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 RSRC1Q96IZ7 334 aaKnown RBP13.3□□□□□ -0.28
CPSF1-210ENST00000532935 RBP7Q96R05 134 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 GSX1Q9H4S2 264 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF442Q9H7R0 627 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 SIAEQ9HAT2 523 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 GRHPRQ9UBQ7 328 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 SIGLEC7Q9Y286 467 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 ADAM18Q9Y3Q7 739 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
CPSF1-210ENST00000532935 TLN2Q9Y4G6 2542 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 TCRBV5S2A0A599 114 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 UNC119BA6NIH7 251 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 B9A039 149 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 MGRN1O60291 552 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 SERPINA5P05154 406 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 NPR2P20594 1047 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 NR4A1P22736 598 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 CDAP32320 146 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 SNRPD2P62316 118 aaKnown RBP13.29□□□□□ -0.28
CPSF1-210ENST00000532935 MS4A2Q01362 244 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 SNTB2Q13425 540 aaKnown RBP13.29□□□□□ -0.28
CPSF1-210ENST00000532935 TNK1Q13470 666 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 RAB35Q15286 201 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 LCN8Q6JVE9 175 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 KRT80Q6KB66 452 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 FAM122BQ7Z309 247 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 DHFR2Q86XF0 187 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF584Q8IVC4 421 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 LRRC18Q8N456 261 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 NABP1Q96AH0 204 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 Q96M85 177 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF570Q96NI8 536 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-210ENST00000532935 GPA33Q99795 319 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 SMR3AQ99954 134 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 RNF121Q9H920 327 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 NSD1Q96L73 2696 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-210ENST00000532935 C2CD3Q4AC94 2353 aa13.29□□□□□ -0.28
CPSF1-210ENST00000532935 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 H7C1C5 153 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 XKRYO14609 159 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 SMAD7O15105 426 aaKnown RBP13.28□□□□□ -0.28
CPSF1-210ENST00000532935 SSX4O60224 188 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 MMP7P09237 267 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-210ENST00000532935 NUDT6P53370 316 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 FXYD6P3P58550 94 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 LCN6P62502 163 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 RIPK1Q13546 671 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 EFNB3Q15768 340 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 SGCAQ16586 387 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 MESTQ5EB52 335 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 THSD4Q6ZMP0 1018 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 DNM1P46Q6ZS02 220 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 ZER1Q7Z7L7 766 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 CLPTM1LQ96KA5 538 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 CADM1Q9BY67 442 aaKnown RBP13.28□□□□□ -0.28
CPSF1-210ENST00000532935 KCNN2Q9H2S1 579 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 PLK3Q9H4B4 646 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 MAGIXQ9H6Y5 334 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 NRIP3Q9NQ35 241 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 IL20RAQ9UHF4 553 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 TMCC3Q9ULS5 477 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 SPEF1Q9Y4P9 236 aa13.28□□□□□ -0.28
CPSF1-210ENST00000532935 TEX13CA0A0J9YWL9 993 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 SLC22A23A1A5C7 686 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 AHCYL1O43865 530 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 OR10H3O60404 316 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 SDHAP31040 664 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 IFNGR2P38484 337 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 MAGEA2P43356 314 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 GALK2Q01415 458 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 KRR1Q13601 381 aaKnown RBP13.27□□□□□ -0.29
CPSF1-210ENST00000532935 GPR139Q6DWJ6 353 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 SMARCD3Q6STE5 483 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 FOXL2NBQ6ZUU3 175 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 SLC30A7Q8NEW0 376 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 CCDC124Q96CT7 223 aaKnown RBP13.27□□□□□ -0.29
CPSF1-210ENST00000532935 RASD2Q96D21 266 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 ASB9Q96DX5 294 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 THTPAQ9BU02 230 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 C1orf198Q9H425 327 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 CCNB1IP1Q9NPC3 277 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
CPSF1-210ENST00000532935 PRSS37A4D1T9 235 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 FAM171A2A8MVW0 826 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 GPRIN2O60269 458 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 KRT36O76013 467 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 PTHP01270 115 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 FPR3P25089 353 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 GLRXP35754 106 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 GUCA1AP43080 201 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-210ENST00000532935 GSSP48637 474 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 YLPM1P49750 1951 aaKnown RBP13.26□□□□□ -0.29
CPSF1-210ENST00000532935 EFNA4P52798 201 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 HMGA2P52926 109 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms