RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 DPPA2Q7Z7J5 298 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 TMEM179BQ7Z7N9 219 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 AQP11Q8NBQ7 271 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 IL17RDQ8NFM7 739 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 ERMAPQ96PL5 475 aaPredicted RBP17.24■□□□□ 0.35
CPSF1-209ENST00000532725 DGCR6LQ9BY27 220 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 YY1AP1Q9H869 796 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 IL20Q9NYY1 176 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 VSX1Q9NZR4 365 aaPredicted RBP17.24■□□□□ 0.35
CPSF1-209ENST00000532725 POU2F3Q9UKI9 436 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 ATP23Q9Y6H3 246 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 RTTNQ86VV8 2226 aa17.24■□□□□ 0.35
CPSF1-209ENST00000532725 OVOL3O00110 214 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 SOCS2O14508 198 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 PPP1R3DO95685 299 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 PAX1P15863 534 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 TTKP33981 857 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 PTDSS1P48651 473 aaKnown RBP17.23■□□□□ 0.35
CPSF1-209ENST00000532725 FAM27BQ5VT28 67 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 RASSF6Q6ZTQ3 369 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 PTCHD4Q6ZW05 846 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 SLC16A14Q7RTX9 510 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 DTX2Q86UW9 622 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 LRRC18Q8N456 261 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 GIPC3Q8TF64 312 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 MS4A3Q96HJ5 214 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 IFT27Q9BW83 186 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 GRIP2Q9C0E4 1043 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 EGLN3Q9H6Z9 239 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 ITPR3Q14573 2671 aa17.23■□□□□ 0.35
CPSF1-209ENST00000532725 IGHV2OR16-5A0A0B4J2B6 119 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 EBAG9O00559 213 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 GNGT2O14610 69 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 IDH3BO43837 385 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 SMPD2O60906 423 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 SERPINA5P05154 406 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 SCG5P05408 212 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 MMP7P09237 267 aaPredicted RBP17.22■□□□□ 0.35
CPSF1-209ENST00000532725 ZNF35P13682 527 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 HGFACQ04756 655 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 RAB39AQ14964 217 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 SGCAQ16586 387 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 SLC36A2Q495M3 483 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 ZNF544Q6NX49 715 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 CD300LDQ6UXZ3 194 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 ADCK1Q86TW2 530 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 ZNF584Q8IVC4 421 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 LRRC75A-AS1Q8N1F1 130 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 OR10G2Q8NGC3 310 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 TMEM171Q8WVE6 324 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
CPSF1-209ENST00000532725 GTPBP3Q969Y2 492 aaKnown RBP17.22■□□□□ 0.35
CPSF1-209ENST00000532725 FEVQ99581 238 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 KCNS3Q9BQ31 491 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 TRAF4Q9BUZ4 470 aaPredicted RBP17.22■□□□□ 0.35
CPSF1-209ENST00000532725 NTN4Q9HB63 628 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 ZNF701Q9NV72 531 aaPredicted RBP17.22■□□□□ 0.35
CPSF1-209ENST00000532725 DNAJB9Q9UBS3 223 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 CDH10Q9Y6N8 788 aa17.22■□□□□ 0.35
CPSF1-209ENST00000532725 RAB36O95755 333 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 TP53P04637 393 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-209ENST00000532725 IGFBP1P08833 259 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-209ENST00000532725 CTLA4P16410 223 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 GSTM3P21266 225 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 APOBEC3AP31941 199 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-209ENST00000532725 FABP6P51161 128 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 C1orf146Q5VVC0 180 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 RPL13AP3Q6NVV1 102 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 OR4F15Q8NGB8 312 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 FBXO17Q96EF6 278 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 DUS3LQ96G46 650 aaKnown RBP17.21■□□□□ 0.35
CPSF1-209ENST00000532725 NIPSNAP1Q9BPW8 284 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 PLA2G12AQ9BZM1 189 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 SYT4Q9H2B2 425 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 RNF121Q9H920 327 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 FAIMQ9NVQ4 179 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 FBXL3Q9UKT7 428 aa17.21■□□□□ 0.35
CPSF1-209ENST00000532725 ARRDC5A6NEK1 342 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 BHLHE40O14503 412 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 SLC16A7O60669 478 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 HIST1H1CP16403 213 aaKnown RBP17.2■□□□□ 0.34
CPSF1-209ENST00000532725 LAP3P28838 519 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 GUCA1AP43080 201 aaPredicted RBP17.2■□□□□ 0.34
CPSF1-209ENST00000532725 COX10Q12887 443 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 CCNIQ14094 377 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 CLEC12AQ5QGZ9 265 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 AGAP6Q5VW22 663 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 TMEM53Q6P2H8 277 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 MUC15Q8N387 334 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 NUP37Q8NFH4 326 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 OR8D4Q8NGM9 314 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 OR4K13Q8NH42 304 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 SNX18Q96RF0 628 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 DDOQ99489 341 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 GSX2Q9BZM3 304 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 NUAK2Q9H093 628 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 KCNN2Q9H2S1 579 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 CXorf56Q9H5V9 222 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 POLE4Q9NR33 117 aa17.2■□□□□ 0.34
CPSF1-209ENST00000532725 PDP1Q9P0J1 537 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms