RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 RHCEP18577 417 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 TCN1P20061 433 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-204ENST00000532550 RPL4P36578 427 aaKnown RBP14.84□□□□□ -0.03
PHRF1-204ENST00000532550 NR4A2P43354 598 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 GPR4P46093 362 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 HSF2Q03933 536 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 FMODQ06828 376 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 GGTLC2Q14390 218 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 KRT72Q14CN4 511 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 FXNQ16595 210 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 TBC1D28Q2M2D7 210 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 ZBED5Q49AG3 693 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 CYB5R2Q6BCY4 276 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 SLC25A47Q6Q0C1 308 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 TSEN54Q7Z6J9 526 aaKnown RBP14.84□□□□□ -0.03
PHRF1-204ENST00000532550 LRRC75AQ8NAA5 344 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 OR13C2Q8NGS9 318 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 NMD3Q96D46 503 aaKnown RBP14.84□□□□□ -0.03
PHRF1-204ENST00000532550 SYT3Q9BQG1 590 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 NDEL1Q9GZM8 345 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 GORASP2Q9H8Y8 452 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 NDUFAF4Q9P032 175 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 GRHPRQ9UBQ7 328 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 REV1Q9UBZ9 1251 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 TAGLN3Q9UI15 199 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 DUSP13Q9UII6 198 aa14.84□□□□□ -0.03
PHRF1-204ENST00000532550 A0A1W2PRQ8 180 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 A8MV72 311 aaPredicted RBP14.83□□□□□ -0.04
PHRF1-204ENST00000532550 VWC2LB2RUY7 222 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 M0R233 179 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 DCTN3O75935 186 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 ITGA2P17301 1181 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 APLNRP35414 380 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 RAD52P43351 418 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 SELENOVP59797 346 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 ERVK-25P63136 954 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 VLDLRP98155 873 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 FHL1Q13642 323 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 DGCR6Q14129 220 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 MSMPQ1L6U9 139 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 IQCCQ4KMZ1 466 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 FGD3Q5JSP0 725 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 RGS7BPQ6MZT1 257 aaPredicted RBP14.83□□□□□ -0.04
PHRF1-204ENST00000532550 PODNL1Q6PEZ8 512 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 PGAM4Q8N0Y7 254 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 ARIH2OSQ8N7S6 290 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 FAM156AQ8NDB6 213 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 SLC7A13Q8TCU3 470 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 TSPAN32Q96QS1 320 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 CDRT15Q96T59 188 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 FZR1Q9UM11 496 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 UGT2A1Q9Y4X1 527 aa14.83□□□□□ -0.04
PHRF1-204ENST00000532550 IGKV1D-43A0A0B4J1Z2 117 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 CDC42EP2O14613 210 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 STAMBPO95630 424 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 LCKP06239 509 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 MMP7P09237 267 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-204ENST00000532550 FAM157BP0CG42 384 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 HSD17B1P14061 328 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 CCNOP22674 350 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 MXRA7P84157 204 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 PABPC1L2AQ5JQF8 200 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 SAMD4BQ5PRF9 694 aaKnown RBP14.82□□□□□ -0.04
PHRF1-204ENST00000532550 FAM27BQ5VT28 67 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 LRP11Q86VZ4 500 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 CLDN22Q8N7P3 220 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 ZNF519Q8TB69 540 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 UBASH3BQ8TF42 649 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 NABP1Q96AH0 204 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 PYURFQ96I23 114 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 FAM46AQ96IP4 442 aaKnown RBP14.82□□□□□ -0.04
PHRF1-204ENST00000532550 C7orf34Q96L11 122 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 OR51B6Q9H340 312 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 KRCC1Q9NPI7 259 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-204ENST00000532550 ARL8BQ9NVJ2 186 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 NDE1Q9NXR1 346 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 MAGEL2Q9UJ55 1249 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 ADAM21Q9UKJ8 722 aa14.82□□□□□ -0.04
PHRF1-204ENST00000532550 A0A1W2PPW3 197 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 XKRYO14609 159 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 DIRAS1O95057 198 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 SNAP29O95721 258 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 CD14P08571 375 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 ZNF32P17041 273 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 STOMP27105 288 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 APEX1P27695 318 aaKnown RBP14.81□□□□□ -0.04
PHRF1-204ENST00000532550 MSX2P35548 267 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-204ENST00000532550 ALDH3B1P43353 468 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 GZMKP49863 264 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 UCP2P55851 309 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 SMIM11AP58511 58 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 C6orf52Q5T4I8 152 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 C16orf89Q6UX73 402 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 PRIMA1Q86XR5 153 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 ALDH16A1Q8IZ83 802 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 ZNF786Q8N393 782 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 PAQR4Q8N4S7 273 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-204ENST00000532550 CPEB3Q8NE35 698 aaKnown RBP14.81□□□□□ -0.04
PHRF1-204ENST00000532550 OR52J3Q8NH60 311 aa14.81□□□□□ -0.04
PHRF1-204ENST00000532550 C11orf40Q8WZ69 217 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms