RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 ATP4BP51164 291 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 DAP3P51398 398 aaKnown RBP12.95□□□□□ -0.34
BRPF3-210ENST00000532538 HILS1P60008 231 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 RPL18Q07020 188 aaKnown RBP12.95□□□□□ -0.34
BRPF3-210ENST00000532538 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 BEND6Q5SZJ8 279 aaPredicted RBP12.95□□□□□ -0.34
BRPF3-210ENST00000532538 DLEU7Q6UYE1 221 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 RETREG3Q86VR2 466 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 CPEB3Q8NE35 698 aaKnown RBP12.95□□□□□ -0.34
BRPF3-210ENST00000532538 GPR32P1Q8NGA4 272 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
BRPF3-210ENST00000532538 CGREF1Q99674 301 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 SLC19A3Q9BZV2 496 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 C7orf69Q9H7B7 122 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 INIPQ9NRY2 104 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 NKIRAS2Q9NYR9 191 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 GMEB1Q9Y692 573 aa12.95□□□□□ -0.34
BRPF3-210ENST00000532538 IGLV3-9A0A075B6K5 115 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 C5orf49A4QMS7 147 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 TRMUO75648 421 aaKnown RBP12.94□□□□□ -0.34
BRPF3-210ENST00000532538 AVPP01185 164 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 ASAH2BP0C7U1 165 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 FPR2P25090 351 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 CDAP32320 146 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 AQP2P41181 271 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 LIMS1P48059 325 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 PCBP3P57721 371 aaKnown RBP12.94□□□□□ -0.34
BRPF3-210ENST00000532538 SLC3A1Q07837 685 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-210ENST00000532538 SELPLGQ14242 412 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 THEM4Q5T1C6 240 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
BRPF3-210ENST00000532538 USP43Q70EL4 1123 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 OR4D11Q8NGI4 311 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 OR10A6Q8NH74 314 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 SGMS2Q8NHU3 365 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 ASB10Q8WXI3 467 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 C22orf15Q8WYQ4 148 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 G6PC2Q9NQR9 355 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 DDX28Q9NUL7 540 aaKnown RBP12.94□□□□□ -0.34
BRPF3-210ENST00000532538 STX18Q9P2W9 335 aaKnown RBP12.94□□□□□ -0.34
BRPF3-210ENST00000532538 SH3GLB1Q9Y371 365 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 CACNG2Q9Y698 323 aa12.94□□□□□ -0.34
BRPF3-210ENST00000532538 TMEM89A2RUT3 159 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 J3QLI3 93 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 OR7A10O76100 309 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 SLC2A10O95528 541 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 IGHV3-13P01766 116 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 IGHV2-5P01817 119 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 MT-ND1P03886 318 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 THY1P04216 161 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 NR2C1P13056 603 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 ZNF32P17041 273 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 MAKP20794 623 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 ERVK-25P63136 954 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 LCN2P80188 198 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 AGBL2Q5U5Z8 902 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 C1QL2Q7Z5L3 287 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 ALDH16A1Q8IZ83 802 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 PFN4Q8NHR9 129 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 SLC25A40Q8TBP6 338 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 TAMM41Q96BW9 452 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 TMPRSS13Q9BYE2 586 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 NANOGQ9H9S0 305 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
BRPF3-210ENST00000532538 MGRN1O60291 552 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 SHOX2O60902 331 aaPredicted RBP12.92□□□□□ -0.34
BRPF3-210ENST00000532538 PCGF2P35227 344 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 ARHGDIAP52565 204 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 UGT2B15P54855 530 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 TAF11Q15544 211 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 C1orf229Q6ZS94 237 aaPredicted RBP12.92□□□□□ -0.34
BRPF3-210ENST00000532538 ABHD4Q8TB40 342 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 TMEM255BQ8WV15 326 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
BRPF3-210ENST00000532538 RBP7Q96R05 134 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 DCLRE1CQ96SD1 692 aaKnown RBP12.92□□□□□ -0.34
BRPF3-210ENST00000532538 CYSLTR2Q9NS75 346 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 PPIAL4AQ9Y536 164 aa12.92□□□□□ -0.34
BRPF3-210ENST00000532538 A0A1W2PPL8 197 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 GMNCA6NCL1 334 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 CENPBD1B2RD01 187 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 TIMM8AO60220 97 aaPredicted RBP12.91□□□□□ -0.34
BRPF3-210ENST00000532538 PRSS23O95084 383 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 LYPD3O95274 346 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 IGHV1-46P01743 117 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
BRPF3-210ENST00000532538 SBK2P0C263 348 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 TNFRSF1BP20333 461 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 GATA3P23771 443 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 MPV17P39210 176 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 PPP1CBP62140 327 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 FMODQ06828 376 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms