RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 RAB1BQ9H0U4 201 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 CDT1Q9H211 546 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 BOLA2Q9H3K6 86 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 ZNF385DQ9H6B1 395 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 PLAC1Q9HBJ0 212 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 EML4Q9HC35 981 aaKnown RBP5.03□□□□□ -1.6
CD44-231ENST00000531110 SLCO1C1Q9NYB5 712 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 ZNF282Q9UDV7 671 aaPredicted RBP5.03□□□□□ -1.6
CD44-231ENST00000531110 ZDHHC2Q9UIJ5 367 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 V9GYH0 126 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 RBBP6Q7Z6E9 1792 aaKnown RBP5.03□□□□□ -1.6
CD44-231ENST00000531110 FLT4P35916 1363 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 CCDC88AQ3V6T2 1871 aa5.03□□□□□ -1.6
CD44-231ENST00000531110 A0A1W2PP18 115 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 A0A1W2PQ09 198 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 BBIP1A8MTZ0 92 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 FAM157AC9JC47 383 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 INMT-MINDY4F8WBC2 141 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 F8WDY8 70 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SLC1A7O00341 560 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SOCS6O14544 535 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 HSPB6O14558 160 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 OR2T1O43869 369 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 B4GALT2O60909 372 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ENTPD3O75355 529 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 NDUFS3O75489 264 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 AP2A2O94973 939 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 AKR7A3O95154 331 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 PDGFBP01127 241 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 ERCC1P07992 297 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 UBBP0CG47 229 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 UBCP0CG48 685 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 CPN1P15169 458 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 RPA2P15927 270 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 PTPN3P26045 913 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 CD80P33681 288 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 CXCR3P49682 368 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 CLCN3P51790 818 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 CDKN2DP55273 166 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 OR10A3P58181 314 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 RANP62826 216 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 RPS27AP62979 156 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 UBA52P62987 128 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 RBPJQ06330 500 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TCP10Q12799 353 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 OVGP1Q12889 678 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 UBE2V1Q13404 147 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SNTB2Q13425 540 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 KEAP1Q14145 624 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 RSU1Q15404 277 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SIX1Q15475 284 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 VAMP3Q15836 100 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ZBTB6Q15916 424 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 MEP1AQ16819 746 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 MORN2Q502X0 79 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 COL5A1-AS1Q5SY13 56 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 AKR1C8PQ5T2L2 129 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 OTUD1Q5VV17 481 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 DCAF12L2Q5VW00 463 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 KHDRBS2Q5VWX1 349 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 PLCXD3Q63HM9 321 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SLC22A10Q63ZE4 541 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 NSUN5P2Q63ZY6 315 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SAXO2Q658L1 398 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 GLYATQ6IB77 296 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ZNF774Q6NX45 483 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 DNM1P34Q6PK57 102 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SLC22A25Q6T423 547 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 EPGNQ6UW88 154 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SCIMPQ6UWF3 145 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 GSG1LQ6UXU4 331 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 IL34Q6ZMJ4 242 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 RNF165Q6ZSG1 346 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TMEM179Q6ZVK1 233 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 HIST2H3AQ71DI3 136 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 MRPL21Q7Z2W9 205 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 KCNMB4Q86W47 210 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SLC26A11Q86WA9 606 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 RBM45Q8IUH3 476 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 H1FOOQ8IZA3 346 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 OFCC1Q8IZS5 231 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SLC34A3Q8N130 599 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SPICQ8N5J4 248 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ZNF555Q8NEP9 628 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 OR56B1Q8NGI3 324 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 OR5L1Q8NGL2 311 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 GPR151Q8TDV0 419 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TBCKQ8TEA7 893 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 SMPDL3BQ92485 455 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TMEM186Q96B77 213 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 PYCR2Q96C36 320 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 URB1-AS1Q96HZ7 61 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 PPP1R16AQ96I34 528 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 VAT1Q99536 393 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 HOPXQ9BPY8 73 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 SOSTQ9BQB4 213 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TRMT61BQ9BVS5 477 aaKnown RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 SNHG12Q9BXW3 62 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 VCX2Q9H322 139 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 UBQLN3Q9H347 655 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms