RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 DTNBP1Q96EV8 351 aa5.74□□□□□ -1.49
CSDE1-213ENST00000530784 SMR3AQ99954 134 aa5.74□□□□□ -1.49
CSDE1-213ENST00000530784 AHSPQ9NZD4 102 aa5.74□□□□□ -1.49
CSDE1-213ENST00000530784 MAT2BQ9NZL9 334 aa5.74□□□□□ -1.49
CSDE1-213ENST00000530784 BCAP29Q9UHQ4 241 aa5.74□□□□□ -1.49
CSDE1-213ENST00000530784 EIF3LQ9Y262 564 aaKnown RBP5.74□□□□□ -1.49
CSDE1-213ENST00000530784 UTP11Q9Y3A2 253 aaKnown RBP5.74□□□□□ -1.49
CSDE1-213ENST00000530784 PCNX1Q96RV3 2341 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 MED13LQ71F56 2210 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 A0A1W2PPQ1 181 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 FRG2CA6NGY1 282 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 ACOX3O15254 700 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 ICOSLGO75144 302 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 UGT2B11O75310 529 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 CBR3O75828 277 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 KLHL2O95198 593 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 RCBTB2O95199 551 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 IGHV2-70P01814 119 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 ATP1B1P05026 303 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 CSNK2A2P19784 350 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-213ENST00000530784 PTGDSP41222 190 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 MAGEA4P43358 317 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 SERPINB8P50452 374 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 CCNG1P51959 295 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 C2orf54Q08AI8 447 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 IFT88Q13099 833 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 EXOSC7Q15024 291 aaKnown RBP5.73□□□□□ -1.49
CSDE1-213ENST00000530784 RASA2Q15283 850 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 UAP1Q16222 522 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-213ENST00000530784 PRR27Q6MZM9 219 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 MFSD12Q6NUT3 480 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 SLC48A1Q6P1K1 146 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 COMMD6Q7Z4G1 85 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 PLCZ1Q86YW0 608 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 GRAMD2AQ8IUY3 354 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 METTL4Q8N3J2 472 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 SPATA4Q8NEY3 305 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 OR52R1Q8NGF1 315 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 RDH11Q8TC12 318 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 FBXO25Q8TCJ0 367 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 PYGO2Q9BRQ0 406 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 FAIM2Q9BWQ8 316 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 RAB17Q9H0T7 212 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 ELOVL6Q9H5J4 265 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 RABEP2Q9H5N1 569 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 CLCF1Q9UBD9 225 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 PRODH2Q9UF12 536 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 DKKL1Q9UK85 242 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 TMCO1Q9UM00 188 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 PLLPQ9Y342 182 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 MTORP42345 2549 aa5.73□□□□□ -1.49
CSDE1-213ENST00000530784 GTF3C1Q12789 2109 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 A0A1W2PNV4 684 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 A0A1W2PPR1 153 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 OR6C70A6NIJ9 312 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 A8MXE2 369 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 SMPD2O60906 423 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 SMIM24O75264 130 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 RBP1P09455 135 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF708P17019 499 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 DRD5P21918 477 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 EEF1B2P24534 225 aaKnown RBP5.72□□□□□ -1.49
CSDE1-213ENST00000530784 SRD5A2P31213 254 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 FEN1P39748 380 aaKnown RBP5.72□□□□□ -1.49
CSDE1-213ENST00000530784 PPICP45877 212 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 STARP49675 285 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 LHX2P50458 406 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 LMO4P61968 165 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 PSPHP78330 225 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 HMGCS1Q01581 520 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 LTB4RQ15722 352 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 GGTA1PQ4G0N0 100 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 TRMT12Q53H54 448 aaKnown RBP5.72□□□□□ -1.49
CSDE1-213ENST00000530784 CST9LP1Q5W188 147 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 OR2A2Q6IF42 318 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 BTN2A1Q7KYR7 527 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 CHMP1BQ7LBR1 199 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 P4HA3Q7Z4N8 544 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 LRRC75A-AS1Q8N1F1 130 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 GBP7Q8N8V2 638 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-213ENST00000530784 OR4F6Q8NGB9 312 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 ZNRF4Q8WWF5 429 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 COL21A1Q96P44 957 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 PKP2Q99959 881 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 NTMT1Q9BV86 223 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 PFDN4Q9NQP4 134 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF226Q9NYT6 803 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF639Q9UID6 485 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 PCTPQ9UKL6 214 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 CES1P1Q9UKY3 287 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 PSME2Q9UL46 239 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 STUB1Q9UNE7 303 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 WIF1Q9Y5W5 379 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 ZNF780BQ9Y6R6 833 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 ITPR3Q14573 2671 aa5.72□□□□□ -1.49
CSDE1-213ENST00000530784 SLC22A20A6NK97 555 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 REM1O75628 298 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 TNFSF13O75888 250 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 BCAS2O75934 225 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 NXPH2O95156 264 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms