RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CTTNBP2Q8WZ74 1663 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 SOGA1O94964 1423 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SMG6Q86US8 1419 aaKnown RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 AK9Q5TCS8 1911 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CTAGE15A4D2H0 777 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 OR5K4A6NMS3 321 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GPR89AB7ZAQ6 455 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 HSBP1L1C9JCN9 74 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8KD6RF30 607 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 H0YIV9 168 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8TH3BQL2 631 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GMFGO60234 142 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 B4GALT2O60909 372 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 MTX2O75431 263 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 FLOT1O75955 427 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 LCA5LO95447 670 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GAPDHP04406 335 aaKnown RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 ASGR1P07306 291 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 KRT7P08729 469 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 TLX1NBP0CAT3 122 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GPR89BP0CG08 455 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8HP0CJ92 632 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 ZNF30P17039 623 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 TBPP20226 339 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 IL12AP29459 219 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 HMOX2P30519 316 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GDI1P31150 447 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SLC26A3P40879 764 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 TUFMP49411 452 aaKnown RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 ARFIP1P53367 373 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 RAB14P61106 215 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 HERVK_113P61574 105 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 TSPAN5P62079 268 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SPIBQ01892 262 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 FGL1Q08830 312 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SCRN3Q0VDG4 424 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 KLHL38Q2WGJ6 581 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 LINC00483Q53H64 154 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 ATAD3BQ5T9A4 648 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SPECC1LQ69YQ0 1117 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 TTC23LQ6PF05 361 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 ENPP6Q6UWR7 440 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 C3orf62Q6ZUJ4 267 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CTAGE6Q86UF2 777 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 ERO1BQ86YB8 467 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CD302Q8IX05 232 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SAXO1Q8IYX7 474 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CYB561D1Q8N8Q1 229 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 ZNF565Q8N9K5 539 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 OR10G2Q8NGC3 310 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 OR56B2PQ8NGI1 322 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CDC26Q8NHZ8 85 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 AGR3Q8TD06 166 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 STARD8Q92502 1023 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SMARCD2Q92925 531 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CIDECQ96AQ7 238 aaPredicted RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 TMA16Q96EY4 203 aaKnown RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 RPRD1AQ96P16 312 aaPredicted RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 PANX2Q96RD6 677 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 FMO2Q99518 471 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SIKE1Q9BRV8 207 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 C9orf16Q9BUW7 83 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 TRIM62Q9BVG3 475 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 GCOM2Q9BZD3 368 aaPredicted RBP2.68□□□□□ -1.98
CTR9-204ENST00000529355 PPA2Q9H2U2 334 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 SLC38A10Q9HBR0 1119 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 NMRK1Q9NWW6 199 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 HMGXB4Q9UGU5 601 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 PCYOX1Q9UHG3 505 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 CDH9Q9ULB4 789 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 STK38LQ9Y2H1 464 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 NSD2O96028 1365 aa2.68□□□□□ -1.98
CTR9-204ENST00000529355 A0A1B0GVL5 298 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8IPA6NC78 632 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 LRCOL1A6NCL2 159 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 OR6C74A6NCV1 312 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8JA6NMD2 632 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 FOXE1O00358 373 aaPredicted RBP2.67□□□□□ -1.98
CTR9-204ENST00000529355 ZNF208O43345 1280 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 KLHL2O95198 593 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 WISP3O95389 354 aaPredicted RBP2.67□□□□□ -1.98
CTR9-204ENST00000529355 PLEKP08567 350 aaPredicted RBP2.67□□□□□ -1.98
CTR9-204ENST00000529355 RPS17P08708 135 aaKnown RBP2.67□□□□□ -1.98
CTR9-204ENST00000529355 GKN3PP0CG01 181 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 PRKACAP17612 351 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 ATF6P18850 670 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 CRABP2P29373 138 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 ALDH3A1P30838 453 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 HOXA6P31267 233 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 NCBP2P52298 156 aaKnown RBP eCLIP2.67□□□□□ -1.98
CTR9-204ENST00000529355 POLR2GP62487 172 aaKnown RBP eCLIP2.67□□□□□ -1.98
CTR9-204ENST00000529355 BEX3Q00994 111 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 KDSRQ06136 332 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 MOBPQ13875 183 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 HADHQ16836 314 aaKnown RBP2.67□□□□□ -1.98
CTR9-204ENST00000529355 FAM83EQ2M2I3 478 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 LYPD2Q6UXB3 125 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 FNDC5Q8NAU1 212 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 CCDC54Q8NEL0 328 aa2.67□□□□□ -1.98
CTR9-204ENST00000529355 OR10G9Q8NGN4 311 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms