RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 A0A1W2PPZ6 126 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 C11orf98E9PRG8 122 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 J3KTA2 159 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 FFAR1O14842 300 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 AKAP8O43823 692 aaKnown RBP7.33□□□□□ -1.24
SSBP3-212ENST00000528930 TSPAN19P0C672 248 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 THRBP10828 461 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 IFNGR1P15260 489 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 NCK1P16333 377 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 FUT1P19526 365 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 AHCYP23526 432 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 PSMD7P51665 324 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CDH11P55287 796 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 TUBA1BP68363 451 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 TUBA4AP68366 448 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 IL1RL1Q01638 556 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CAMK2DQ13557 499 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CNPY1Q3B7I2 92 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 DNAL1Q4LDG9 190 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CARD17Q5XLA6 110 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 ANKRD16Q6P6B7 361 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 B3GLCTQ6Y288 498 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 TUBA1AQ71U36 451 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 SLC35D2Q76EJ3 337 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF627Q7L945 461 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 DTX2Q86UW9 622 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CROCCP3Q8IVE0 287 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 GPR137CQ8N3F9 429 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 FBLIM1Q8WUP2 373 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 TMEM239Q8WW34 195 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 LIPHQ8WWY8 451 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 STMN2Q93045 179 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 PRRC1Q96M27 445 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 HS6ST2Q96MM7 605 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 TRAF4Q9BUZ4 470 aaPredicted RBP7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CADM1Q9BY67 442 aaKnown RBP7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CRLF2Q9HC73 371 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 OBP2BQ9NPH6 170 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 MAN2C1Q9NTJ4 1040 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 ARL8BQ9NVJ2 186 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 CRNNQ9UBG3 495 aaPredicted RBP7.33□□□□□ -1.24
SSBP3-212ENST00000528930 BLOC1S6Q9UL45 172 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 PLCE1Q9P212 2302 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF503-AS2A6NEH8 195 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF726A6NNF4 738 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF99A8MXY4 864 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-212ENST00000528930 BLOC1S5-TXNDC5H3BN57 136 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 M0R3G1 203 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 GSTA4O15217 222 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 PIP5K1CO60331 668 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 SERPINI2O75830 405 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 OR7A10O76100 309 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 PRSS23O95084 383 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 OR6A2O95222 327 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF682O95780 498 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 SERPINA1P01009 418 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 IGKV3-15P01624 115 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 IGLV1-44P01699 117 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 UMPSP11172 480 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 TTKP33981 857 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 CDKN1AP38936 164 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 YAP1P46937 504 aaKnown RBP7.32□□□□□ -1.24
SSBP3-212ENST00000528930 BIDP55957 195 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ACTR3P61158 418 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 RPL18Q07020 188 aaKnown RBP7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ST3GAL3Q11203 375 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF124Q15973 351 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 FXNQ16595 210 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 IFI44LQ53G44 452 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 FOXB2Q5VYV0 432 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 GLYATQ6IB77 296 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 CDPF1Q6NVV7 123 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 SLC22A25Q6T423 547 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 RNF148Q8N7C7 305 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 FAM169BQ8N8A8 192 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 RBM15BQ8NDT2 890 aaKnown RBP7.32□□□□□ -1.24
SSBP3-212ENST00000528930 OR6X1Q8NH79 312 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 TMEM54Q969K7 222 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 SGTBQ96EQ0 304 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 ADAD1Q96M93 576 aaKnown RBP7.32□□□□□ -1.24
SSBP3-212ENST00000528930 SLC38A2Q96QD8 506 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 DHRS9Q9BPW9 319 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 KCTD14Q9BQ13 255 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-212ENST00000528930 RHNO1Q9BSD3 238 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 SPAG4Q9NPE6 437 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 B3GNT2Q9NY97 397 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 RHCGQ9UBD6 479 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 CD300AQ9UGN4 299 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 EGFL7Q9UHF1 273 aa7.32□□□□□ -1.24
SSBP3-212ENST00000528930 A0A087WUU8 490 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 ATP6V1G2-DDX39BF2Z307 99 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 GYG2O15488 501 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 RNF13O43567 381 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 NDUFS7O75251 213 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 ENTPD5O75356 428 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 SEC14L2O76054 403 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 HIST1H2ABP04908 130 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 IFNW1P05000 195 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 CELA3BP08861 270 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 PGA4P0DJD7 388 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms