RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 ALDH16A1Q8IZ83 802 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 LRRC18Q8N456 261 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 GTF2H4Q92759 462 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 LRRC58Q96CX6 371 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 MCHR1Q99705 422 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 PAIP1Q9H074 479 aaKnown RBP9.79□□□□□ -0.84
CMTM1-211ENST00000528484 NANOGQ9H9S0 305 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 SLCO1B3Q9NPD5 702 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ZNF69Q9UC07 566 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 LEF1Q9UJU2 399 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ZNF229Q9UJW7 825 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 TRIM33Q9UPN9 1127 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ANGPT4Q9Y264 503 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 NPTNQ9Y639 398 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ARHGAP32A7KAX9 2087 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 VWFP04275 2813 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 C5orf49A4QMS7 147 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 GMNCA6NCL1 334 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 CENPBD1B2RD01 187 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 CH25HO95992 272 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 CRYBA1P05813 215 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 PGA4P0DJD7 388 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 PGA3P0DJD8 388 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 TNFRSF1AP19438 455 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 AQP1P29972 269 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 DAP3P51398 398 aaKnown RBP9.78□□□□□ -0.84
CMTM1-211ENST00000528484 VSNL1P62760 191 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 ZNF74Q16587 644 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 PABPC1L2AQ5JQF8 200 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 THEM4Q5T1C6 240 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 LRFN4Q6PJG9 635 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 SLC2A7Q6PXP3 512 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 BTNL3Q6UXE8 466 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 NHLRC1Q6VVB1 395 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 SPATC1Q76KD6 591 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 ANKRD42Q8N9B4 389 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 DEFB108BQ8NET1 73 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 NOXO1Q8NFA2 376 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 OR9I1Q8NGQ6 314 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 IPCEF1Q8WWN9 437 aaPredicted RBP9.78□□□□□ -0.84
CMTM1-211ENST00000528484 GTF3AQ92664 365 aaKnown RBP9.78□□□□□ -0.84
CMTM1-211ENST00000528484 MCHR2Q969V1 340 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 DCLRE1CQ96SD1 692 aaKnown RBP9.78□□□□□ -0.84
CMTM1-211ENST00000528484 SIAEQ9HAT2 523 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 ELOVL3Q9HB03 270 aa9.78□□□□□ -0.84
CMTM1-211ENST00000528484 BLOC1S5-TXNDC5H3BN57 136 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 KPNA4O00629 521 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 SURF4O15260 269 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TIMM8AO60220 97 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TPST1O60507 370 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 KNG1P01042 644 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF12P17014 697 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 PCGF2P35227 344 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 MMP15P51511 669 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TNFAIP6P98066 277 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TAF11Q15544 211 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF362Q5T0B9 420 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 MBNL2Q5VZF2 373 aaKnown RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 LEG1Q6P5S2 330 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 CROCCP2Q86T23 111 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 OR52E2Q8NGJ4 325 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 ABHD4Q8TB40 342 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 SLC25A40Q8TBP6 338 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 KLF14Q8TD94 323 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 GEMIN6Q8WXD5 167 aaKnown RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TMIGD2Q96BF3 282 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 MPP4Q96JB8 637 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF347Q96SE7 839 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 OR2J1Q9GZK6 312 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TMEM38AQ9H6F2 299 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 PATZ1Q9HBE1 687 aaKnown RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 MMP26Q9NRE1 261 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 TAS2R5Q9NYW4 299 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-211ENST00000528484 EGFL7Q9UHF1 273 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 IL20RAQ9UHF4 553 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 INSIG2Q9Y5U4 225 aa9.77□□□□□ -0.85
CMTM1-211ENST00000528484 ZSCAN5BA6NJL1 495 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 CPSF4LA6NMK7 179 aaKnown RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 ZNF500O60304 480 aaPredicted RBP9.76□□□□□ -0.85
CMTM1-211ENST00000528484 TGDSO95455 350 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 IGHV2-70P01814 119 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 CD55P08174 381 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 ADH4P08319 380 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 GSTM3P21266 225 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 MPV17P39210 176 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 PCBD1P61457 104 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 PPP1CBP62140 327 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 BTG1P62324 171 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 CD47Q08722 323 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 SLC9A3R2Q15599 337 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 SGCAQ16586 387 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 OCLNQ16625 522 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 MTX3Q5HYI7 312 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 ENTPD8Q5MY95 495 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 C16orf87Q6PH81 154 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 COMTD1Q86VU5 262 aa9.76□□□□□ -0.85
CMTM1-211ENST00000528484 BCL6BQ8N143 479 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms