RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PELOQ9BRX2 385 aaKnown RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 POFUT1Q9H488 388 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 Q9N2J8 555 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 GRHPRQ9UBQ7 328 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 DCTN6O00399 190 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 CD14P08571 375 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 CCKBRP32239 447 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 MRPS21P82921 87 aaKnown RBP11.33□□□□□ -0.6
CAPN1-208ENST00000527323 LRRC37A5PQ49AS3 106 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 ANKRD16Q6P6B7 361 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 OR2I1PQ8NGU4 316 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 FLVCR1-AS1Q8TAF5 88 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-208ENST00000527323 MRPS24Q96EL2 167 aaKnown RBP11.33□□□□□ -0.6
CAPN1-208ENST00000527323 EXOSC3Q9NQT5 275 aaKnown RBP11.33□□□□□ -0.6
CAPN1-208ENST00000527323 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 PCDHB16Q9NRJ7 776 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 DTX4Q9Y2E6 619 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 FANCMQ8IYD8 2048 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 PCDH15Q96QU1 1955 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 OR2W5A6NFC9 320 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 SERINC4A6NH21 518 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 TNFSF14O43557 240 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 PRAMEF2O60811 474 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 AQP8O94778 261 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 HPGDP15428 266 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 TAF13Q15543 124 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 DEFB110Q30KQ9 67 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 C2orf76Q3KRA6 126 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-208ENST00000527323 OR6K3Q8NGY3 331 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 STK35Q8TDR2 534 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 C3orf49Q96BT1 292 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 MRTO4Q9UKD2 239 aaKnown RBP11.33□□□□□ -0.6
CAPN1-208ENST00000527323 PLCL2Q9UPR0 1127 aa11.33□□□□□ -0.6
CAPN1-208ENST00000527323 OR4C45A6NMZ5 311 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 EFCAB7A8K855 629 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 GMFGO60234 142 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 GPANK1O95872 356 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 HPP00738 406 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 CSN2P05814 226 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 THEGLP0DJG4 465 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ERV3-1Q14264 604 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ATXN7L3Q14CW9 347 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-208ENST00000527323 RAB11BQ15907 218 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ETFDHQ16134 617 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 BEX5Q5H9J7 111 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 RPS4Y2Q8TD47 263 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 LRRC46Q96FV0 321 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF416Q9BWM5 594 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 WDR76Q9H967 626 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 HRASLS2Q9NWW9 162 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 UPB1Q9UBR1 384 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 TRBV5-5A0A0J9YX44 114 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM272A0A1B0GTI8 110 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 RFPL4AA6NLU0 287 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 RFPL4AL1F8VTS6 287 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 M0QYG6 137 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 CDC40O60508 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF432O94892 652 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 RAB3DO95716 219 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 LSSP48449 732 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 GRM7Q14831 915 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 NKAIN2Q5VXU1 208 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 LRRC69Q6ZNQ3 347 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ST8SIA2Q92186 375 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 FAM3DQ96BQ1 224 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 FOXN4Q96NZ1 517 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 G6PC3Q9BUM1 346 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 SMOC1Q9H4F8 434 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF230Q9UIE0 474 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM212A6NML5 194 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 B4DGG1 531 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 WDPCPO95876 746 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 OR4E1P0C645 316 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 RPA2P15927 270 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 SCGB2B2Q4G0G5 96 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 LIN54Q6MZP7 749 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 SLC25A32Q9H2D1 315 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 SLC6A15Q9H2J7 730 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 COMMD9Q9P000 198 aa11.32□□□□□ -0.6
CAPN1-208ENST00000527323 MYEF2Q9P2K5 600 aaKnown RBP11.32□□□□□ -0.6
CAPN1-208ENST00000527323 FARSAQ9Y285 508 aaKnown RBP11.32□□□□□ -0.6
CAPN1-208ENST00000527323 THADAQ6YHU6 1953 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 KANTRA0A1W2PQU2 76 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM82A0PJX8 343 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 SRPX2O60687 465 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 AKR7A3O95154 331 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 AMY2AP04746 511 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 HNRNPA2B1P22626 353 aaKnown RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 RAB38P57729 211 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF169Q14929 603 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 MPPED2Q15777 294 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms