RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 UBE2AP49459 152 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ACLYP53396 1101 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 PRRX1P54821 245 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 MRPS22P82650 360 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SPAG1Q07617 926 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 TGM3Q08188 693 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 IFFO1Q0D2I5 559 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 BST2Q10589 180 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 IFT88Q13099 833 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ITGB3BPQ13352 177 aaPredicted RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 PPIL2Q13356 520 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 COTL1Q14019 142 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 VGLL4Q14135 290 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 GRB7Q14451 532 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 DUSP7Q16829 419 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ZBED5Q49AG3 693 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 VPS26BQ4G0F5 336 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SPIN3Q5JUX0 258 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SPANXN2Q5MJ10 180 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 DNLZQ5SXM8 178 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 THEM4Q5T1C6 240 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 CASC10Q5T4H9 136 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ARMC12Q5T9G4 340 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 RAET1LQ5VY80 246 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF880Q6PDB4 577 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 TMEM179Q6ZVK1 233 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OTUD6AQ7L8S5 288 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 FAM228AQ86W67 206 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ECHDC2Q86YB7 292 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 PSTKQ8IV42 348 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC22A9Q8IVM8 553 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 IQCF2Q8IXL9 164 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 PDIK1LQ8N165 341 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 BBS5Q8N3I7 341 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF321PQ8N8H1 164 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 VN1R2Q8NFZ6 395 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OR4C5Q8NGB2 326 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OR52K2Q8NGK3 314 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OR1L4Q8NGR5 311 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OR2G2Q8NGZ5 317 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 RHEBL1Q8TAI7 183 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 LRRC20Q8TCA0 184 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 MCOLN3Q8TDD5 553 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 PAQR8Q8TEZ7 354 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 CCDC12Q8WUD4 166 aaPredicted RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SCFD1Q8WVM8 642 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SLC38A4Q969I6 547 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 NT5C3BQ969T7 300 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OR8B4Q96RC9 309 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 CNN2Q99439 309 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SORT1Q99523 831 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 TSG101Q99816 390 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SH3GL3Q99963 347 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 MRPL45Q9BRJ2 306 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 TMEM246Q9BRR3 403 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 CENPKQ9BS16 269 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 RIOK2Q9BVS4 552 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 BEX2Q9BXY8 128 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 GPR61Q9BZJ8 451 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 OR11A1Q9GZK7 315 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 STMN4Q9H169 189 aaPredicted RBP0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 SRMSQ9H3Y6 488 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ANKRD19PQ9H560 264 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 HAUS4Q9H6D7 363 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 CCNB1IP1Q9NPC3 277 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 AGPAT3Q9NRZ7 376 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 HYPKQ9NX55 129 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 KLHL28Q9NXS3 571 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF226Q9NYT6 803 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 IFNKQ9P0W0 207 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 CHRNA9Q9UGM1 479 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ZNF639Q9UID6 485 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 KIF25Q9UIL4 384 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 KIAA1257Q9ULG3 409 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 MMP17Q9ULZ9 603 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 MEMO1Q9Y316 297 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 ASB3Q9Y575 518 aa0.93□□□□□ -2.26
ECHDC1-219ENST00000526299 WDR19Q8NEZ3 1342 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 SYNRGQ9UMZ2 1314 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 TUBGCP6Q96RT7 1819 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 TRAV39A0A0B4J263 110 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 XKRY2A2RUG3 117 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 C7orf66A4D0T2 115 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 GOLGA8OA6NCC3 632 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 RBMY1BA6NDE4 496 aaKnown RBP0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 RBMY1EA6NEQ0 496 aaKnown RBP0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 LRRIQ3A6PVS8 624 aaPredicted RBP0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 C12orf77C9JDV5 145 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 GOLGA8NF8WBI6 632 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 BOLA2-SMG1P6H3BVE0 249 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 NDUFS8O00217 210 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 CCL21O00585 134 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 AIM2O14862 343 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 CETN3O15182 167 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 RNF13O43567 381 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 CHMP2AO43633 222 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 ANGPTL7O43827 346 aa0.92□□□□□ -2.26
ECHDC1-219ENST00000526299 CDC40O60508 579 aaKnown RBP eCLIP0.92□□□□□ -2.261e-6■□□□□ 9.9
ECHDC1-219ENST00000526299 OR7A10O76100 309 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms