RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 SCGB2A2Q13296 93 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ILKQ13418 452 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TFDP2Q14188 446 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 UAP1Q16222 522 aaPredicted RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 ALKBH6Q3KRA9 238 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TIMM50Q3ZCQ8 353 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 SLC22A6Q4U2R8 563 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PAN3Q58A45 887 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 Q5BKY6 102 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 VWA2Q5GFL6 755 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 RABGAP1LQ5R372 815 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 FBXW9Q5XUX1 488 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ANKRD26P1Q6NSI1 321 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ACSM5Q6NUN0 579 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PMF1Q6P1K2 205 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PODNL1Q6PEZ8 512 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TMEM64Q6YI46 380 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 SIGLEC15Q6ZMC9 328 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TMEM26Q6ZUK4 368 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 KCTD9Q7L273 389 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ABHD12BQ7Z5M8 362 aaPredicted RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 S100A7AQ86SG5 101 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ZNF410Q86VK4 478 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 THOC6Q86W42 341 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 TMEM17Q86X19 198 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 Q8N7P7 452 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 KIAA0895Q8NCT3 520 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 FAM83FQ8NEG4 500 aaPredicted RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 OR10H4Q8NGA5 316 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 SETD6Q8TBK2 473 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TRUB1Q8WWH5 349 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 ELMO1Q92556 727 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TCEAL3Q969E4 200 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 DCPSQ96C86 337 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 NTNG2Q96CW9 530 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 C5orf30Q96GV9 206 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ERGIC2Q96RQ1 377 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 EBNA1BP2Q99848 306 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 TUBGCP2Q9BSJ2 902 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ANKRD60Q9BZ19 345 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 RAB17Q9H0T7 212 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 DNTTIP1Q9H147 329 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ZNF665Q9H7R5 613 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 AUNIPQ9H7T9 357 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PRMT8Q9NR22 394 aaPredicted RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 DNAJC17Q9NVM6 304 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 SLC17A7Q9P2U7 560 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 C3orf18Q9UK00 162 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PSMD13Q9UNM6 376 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ABCG2Q9UNQ0 655 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 GPR132Q9UNW8 380 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 MOKQ9UQ07 419 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PLEKHA6Q9Y2H5 1048 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ZNF256Q9Y2P7 627 aaPredicted RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 GOLT1BQ9Y3E0 138 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TBL2Q9Y4P3 447 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 ETV7Q9Y603 341 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ZFYVE9O95405 1425 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PTCH1Q13635 1447 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 FMN1Q68DA7 1419 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 YLPM1P49750 1951 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 ADGRB2O60241 1585 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ADGRL2O95490 1459 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 CCDC18Q5T9S5 1454 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ARHGAP35Q9NRY4 1499 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 PTPN23Q9H3S7 1636 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TRPM2O94759 1503 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 TRAV9-2A0A087WT02 112 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 A0A087WZY1 265 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 ARHGAP42A6NI28 874 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 PP2D1A8MPX8 630 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 FOXI3A8MTJ6 420 aaPredicted RBP2.89□□□□□ -1.95
CD44-217ENST00000525348 FAM25AB3EWG3 89 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 FAM25CB3EWG5 89 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 FAM25GB3EWG6 89 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 PRAMEF26H0Y7S4 382 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 SMLR1H3BR10 107 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 PRMT5O14744 637 aaPredicted RBP2.89□□□□□ -1.95
CD44-217ENST00000525348 OR10H3O60404 316 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 SRPX2O60687 465 aaPredicted RBP2.89□□□□□ -1.95
CD44-217ENST00000525348 UGT2B11O75310 529 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 ADAP1O75689 374 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 IFNA10P01566 189 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 CHRNGP07510 517 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 OR9G9P0C7N8 305 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 COX4I1P13073 169 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 SPI1P17947 270 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 GLRA1P23415 457 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 IL12BP29460 328 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 OR1D2P34982 312 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 MAS1LP35410 378 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 CEACAM3P40198 252 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 MAP2K4P45985 399 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 KCNJ3P48549 501 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 ARRB1P49407 418 aaPredicted RBP2.89□□□□□ -1.95
CD44-217ENST00000525348 DAPK1P53355 1430 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 CEBPGP53567 150 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 ERVK-25P63136 954 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 SLC7A9P82251 487 aa2.89□□□□□ -1.95
CD44-217ENST00000525348 IRF8Q02556 426 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms