RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 RHNO1Q9BSD3 238 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 MRPL13Q9BYD1 178 aaKnown RBP10.86□□□□□ -0.67
SMCO4-202ENST00000525141 NDEL1Q9GZM8 345 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 NOX3Q9HBY0 568 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF224Q9NZL3 707 aa10.86□□□□□ -0.67
SMCO4-202ENST00000525141 CHD3Q12873 2000 aaKnown RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 UNC119BA6NIH7 251 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF99A8MXY4 864 aaPredicted RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 MCIDASD6RGH6 385 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 CD5LO43866 347 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 FKBP6O75344 327 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 CIB2O75838 187 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 NDUFB2O95178 105 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 IGHG1P01857 330 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 PGA4P0DJD7 388 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 PGA3P0DJD8 388 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 ACADSP16219 412 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 THBS4P35443 961 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 SERPINF1P36955 418 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 GSSP48637 474 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 CSNK1A1P48729 337 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 EFNA4P52798 201 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 NUDT6P53370 316 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 CTXN1P60606 82 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 UBE2NP61088 152 aaKnown RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 RPL27P61353 136 aaKnown RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 TSPAN31Q12999 210 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 MSMPQ1L6U9 139 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 FAM205BPQ63HN1 556 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF770Q6IQ21 691 aaPredicted RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF627Q7L945 461 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 MDP1Q86V88 176 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 OR6N1Q8NGY5 312 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 C10orf105Q8TEF2 133 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 SLCO4A1Q96BD0 722 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 RSRC1Q96IZ7 334 aaKnown RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 DOK1Q99704 481 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 GPA33Q99795 319 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 CA10Q9NS85 328 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 GLTPQ9NZD2 209 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 DNAJB9Q9UBS3 223 aa10.85□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF346Q9UL40 294 aaKnown RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 SAMHD1Q9Y3Z3 626 aaKnown RBP10.85□□□□□ -0.67
SMCO4-202ENST00000525141 VWC2LB2RUY7 222 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 GNGT2O14610 69 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 CCNB2O95067 398 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 GASTP01350 101 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 HLA-HP01893 362 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 CRYAAP02489 173 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 CD14P08571 375 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 OR4A8P0C604 315 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 NR2C1P13056 603 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF26P17031 533 aaPredicted RBP10.84□□□□□ -0.67
SMCO4-202ENST00000525141 RPL4P36578 427 aaKnown RBP10.84□□□□□ -0.67
SMCO4-202ENST00000525141 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
SMCO4-202ENST00000525141 LOXL1Q08397 574 aaPredicted RBP10.84□□□□□ -0.67
SMCO4-202ENST00000525141 MELKQ14680 651 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 PGBD2Q6P3X8 592 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 SMARCD3Q6STE5 483 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 CCDC36Q8IYA8 594 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 ZCCHC24Q8N2G6 241 aaKnown RBP10.84□□□□□ -0.67
SMCO4-202ENST00000525141 ARIH2OSQ8N7S6 290 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 FNDC8Q8TC99 324 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 SORCS2Q96PQ0 1159 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 GPX7Q96SL4 187 aaPredicted RBP10.84□□□□□ -0.67
SMCO4-202ENST00000525141 ULBP2Q9BZM5 246 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 PLK3Q9H4B4 646 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 NRIP3Q9NQ35 241 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 ARMC1Q9NVT9 282 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 VNN3Q9NY84 501 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 GRHPRQ9UBQ7 328 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 PMF1-BGLAPU3KQ54 211 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 U3KQV3 271 aa10.84□□□□□ -0.67
SMCO4-202ENST00000525141 MALRD1Q5VYJ5 2156 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 IGHV2OR16-5A0A0B4J2B6 119 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 ARRDC5A6NEK1 342 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 A6NIZ1 184 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 AHCYL1O43865 530 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 DEAF1O75398 565 aaPredicted RBP10.83□□□□□ -0.68
SMCO4-202ENST00000525141 TRMUO75648 421 aaKnown RBP10.83□□□□□ -0.68
SMCO4-202ENST00000525141 PATE4P0C8F1 98 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 ZNF35P13682 527 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 APEHP13798 732 aaKnown RBP10.83□□□□□ -0.68
SMCO4-202ENST00000525141 ARR3P36575 388 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 IDH3GP51553 393 aaPredicted RBP10.83□□□□□ -0.68
SMCO4-202ENST00000525141 CLRN1P58418 232 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 FXYD6P3P58550 94 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 DSCR9P59020 149 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 RAP1BP61224 184 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 RAP1AP62834 184 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 PPP2R2BQ00005 443 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 RUNX1T1Q06455 604 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 PIGFQ07326 219 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 COX10Q12887 443 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 PPP1R8Q12972 351 aaKnown RBP10.83□□□□□ -0.68
SMCO4-202ENST00000525141 CCNIQ14094 377 aa10.83□□□□□ -0.68
SMCO4-202ENST00000525141 EFNB3Q15768 340 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms