RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 UBASH3BQ8TF42 649 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 SOX7Q9BT81 388 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 NMNAT1Q9HAN9 279 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-220ENST00000522900 CDH20Q9HBT6 801 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
SPIDR-220ENST00000522900 ENPP4Q9Y6X5 453 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 LRP5LA4QPB2 252 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 MGRN1O60291 552 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 CLPTM1O96005 669 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 ERCC1P07992 297 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-220ENST00000522900 GIFP27352 417 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 APEX1P27695 318 aaKnown RBP16.04■□□□□ 0.16
SPIDR-220ENST00000522900 PRDX6P30041 224 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 LSP1P33241 339 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 GPR4P46093 362 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 TAF11Q15544 211 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 ALKBH6Q3KRA9 238 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 PABPC1L2AQ5JQF8 200 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 ARIH2OSQ8N7S6 290 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 FAM156AQ8NDB6 213 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 MSI2Q96DH6 328 aaKnown RBP16.04■□□□□ 0.16
SPIDR-220ENST00000522900 SMURF2Q9HAU4 748 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 ADA2Q9NZK5 511 aa16.04■□□□□ 0.16
SPIDR-220ENST00000522900 M0R233 179 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 NDUFAB1O14561 156 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 APEHP13798 732 aaKnown RBP16.03■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF23P17027 643 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF32P17041 273 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 RPS23P62266 143 aaKnown RBP16.03■□□□□ 0.16
SPIDR-220ENST00000522900 ERVK-25P63136 954 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 PLP2Q04941 152 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 ELFN2Q5R3F8 820 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 RGS7BPQ6MZT1 257 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-220ENST00000522900 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 TMPRSS11FQ6ZWK6 438 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 CPLX4Q7Z7G2 160 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 AKR7LQ8NHP1 331 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 SLC7A13Q8TCU3 470 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 C7orf34Q96L11 122 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 RBP7Q96R05 134 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 ALG12Q9BV10 488 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 MS4A5Q9H3V2 200 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 SPAG4Q9NPE6 437 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 DCAF13Q9NV06 445 aaKnown RBP16.03■□□□□ 0.16
SPIDR-220ENST00000522900 NDUFAF4Q9P032 175 aa16.03■□□□□ 0.16
SPIDR-220ENST00000522900 YLPM1P49750 1951 aaKnown RBP16.02■□□□□ 0.16
SPIDR-220ENST00000522900 IQCMA0A1B0GVH7 501 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 H7C1C5 153 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 LILRA1O75019 489 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 DIRAS1O95057 198 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 HPXP02790 462 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 SCG5P05408 212 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 NAT2P11245 290 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 COL8A2P25067 703 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 LAP3P28838 519 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 IL2RGP31785 369 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 SLC9A3P48764 834 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 GZMKP49863 264 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 UCP2P55851 309 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 LCN6P62502 163 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 PSG4Q00888 419 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 HSF2Q03933 536 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 RIN1Q13671 783 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 TBC1D28Q2M2D7 210 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 CHRFAM7AQ494W8 412 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 THEM4Q5T1C6 240 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 FAM27BQ5VT28 67 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF540Q8NDQ6 660 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 OR1J2Q8NGS2 313 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 KCNN2Q9H2S1 579 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 CCNB1IP1Q9NPC3 277 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 RPS6KA6Q9UK32 745 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 ADAM18Q9Y3Q7 739 aa16.02■□□□□ 0.16
SPIDR-220ENST00000522900 CHD3Q12873 2000 aaKnown RBP16.02■□□□□ 0.15
SPIDR-220ENST00000522900 LOC100509620A0A075B734 347 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 LOC100289279A0A1B0GTE1 492 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 A0A1W2PPW3 197 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 SLC22A23A1A5C7 686 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 LMX1BO60663 402 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 SNAP29O95721 258 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 PTHP01270 115 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 LCKP06239 509 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 H1F0P07305 194 aaKnown RBP16.01■□□□□ 0.15
SPIDR-220ENST00000522900 CCNOP22674 350 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 APLNRP35414 380 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 MSX2P35548 267 aaPredicted RBP16.01■□□□□ 0.15
SPIDR-220ENST00000522900 RPL4P36578 427 aaKnown RBP16.01■□□□□ 0.15
SPIDR-220ENST00000522900 TRIP10Q15642 601 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 ANKDD1AQ495B1 522 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 ZBED5Q49AG3 693 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 RRM2BQ7LG56 351 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 CYP4Z1Q86W10 505 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 ICA1LQ8NDH6 482 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 FAM46AQ96IP4 442 aaKnown RBP16.01■□□□□ 0.15
SPIDR-220ENST00000522900 POM121L2Q96KW2 1035 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 Q96M85 177 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 WNT5BQ9H1J7 359 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 C1orf198Q9H425 327 aa16.01■□□□□ 0.15
SPIDR-220ENST00000522900 TAAR3PQ9P1P4 343 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms